Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0896
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015ADE13 Cluster: hypothetical protein NEMVEDRAFT_...    33   6.7  
UniRef50_A3I7Q9 Cluster: Glyoxalase family protein; n=11; Bacter...    33   6.7  
UniRef50_Q4UFA7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_A7DSC0 Cluster: Restriction modification system DNA spe...    33   6.7  
UniRef50_Q4YCB1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  
UniRef50_Q4WAS9 Cluster: Helicase swr1; n=8; Eurotiomycetidae|Re...    33   8.9  

>UniRef50_UPI00015ADE13 Cluster: hypothetical protein
           NEMVEDRAFT_v1g78424; n=1; Nematostella vectensis|Rep:
           hypothetical protein NEMVEDRAFT_v1g78424 - Nematostella
           vectensis
          Length = 138

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 509 SQYYHLYYIICVTSK*F*YIGYFNYF*TWLKHYTLRLVTVPQG 637
           SQYYH YY++  T     Y+G   Y+     +Y + ++TVP G
Sbjct: 87  SQYYHYYYMLITTVPGGGYLGTSQYY----HYYYMLIITVPGG 125


>UniRef50_A3I7Q9 Cluster: Glyoxalase family protein; n=11;
           Bacteria|Rep: Glyoxalase family protein - Bacillus sp.
           B14905
          Length = 130

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = +3

Query: 249 KNLDLLHLCVFRNKKYIFTRTGIETTKYQTPE 344
           +NL+LLH  +  +KKY +TR GIETT + + E
Sbjct: 81  ENLELLHSNLI-SKKYKYTRPGIETTPWNSQE 111


>UniRef50_Q4UFA7 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 134

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 101 TSFLWISFLWSRWPPKRLCPQKMCK 27
           T FLW++FL S++     CP+ +CK
Sbjct: 23  TVFLWLTFLASKFSKSHFCPENICK 47


>UniRef50_A7DSC0 Cluster: Restriction modification system DNA
           specificity domain; n=1; Candidatus Nitrosopumilus
           maritimus SCM1|Rep: Restriction modification system DNA
           specificity domain - Candidatus Nitrosopumilus maritimus
           SCM1
          Length = 438

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 259 IFYIYVCFGIKNIFSLALESKQQNI 333
           +FY Y+ FG K IFS+A  +KQQN+
Sbjct: 352 LFYFYLYFGEKIIFSIAQGTKQQNL 376


>UniRef50_Q4YCB1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 48

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 95  KMYYKNSCVKKLTLRLEIKQHDFHLLVLNAHIKTINIHF 211
           K+ YK    KKL+ + +IK   +++   N ++K IN HF
Sbjct: 4   KIVYKGLAFKKLSTKCKIKCCVYNIFFNNVYVKCINFHF 42


>UniRef50_Q4WAS9 Cluster: Helicase swr1; n=8; Eurotiomycetidae|Rep:
            Helicase swr1 - Aspergillus fumigatus (Sartorya fumigata)
          Length = 1695

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 298  FSLALESKQQNIKRRNGHYLVMPTVKNINLMRSNK 402
            + L L+  QQ +KRRN HY+V+    NI   RS K
Sbjct: 937  YQLVLQD-QQVLKRRNWHYMVLDEAHNIKNFRSQK 970


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,468,876
Number of Sequences: 1657284
Number of extensions: 13238683
Number of successful extensions: 29119
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29089
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)