Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0893
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 131 2e-30
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 131 2e-30
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 131 2e-30
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 131 2e-30
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 131 2e-30
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 131 2e-30
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 131 2e-30
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 131 3e-30
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 131 3e-30
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 131 3e-30
AB014589-1|BAA31664.1| 547|Homo sapiens KIAA0689 protein protein. 103 6e-22
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 50 8e-06
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 50 8e-06
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 50 8e-06
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 50 8e-06
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 50 8e-06
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 50 8e-06
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 49 1e-05
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 48 2e-05
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 48 2e-05
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 48 2e-05
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 48 2e-05
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 46 1e-04
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 46 1e-04
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 46 1e-04
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 46 1e-04
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 46 1e-04
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 46 1e-04
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 46 1e-04
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 46 2e-04
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 46 2e-04
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 46 2e-04
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 46 2e-04
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 46 2e-04
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 46 2e-04
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 46 2e-04
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 46 2e-04
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 46 2e-04
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 44 7e-04
BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein. 44 7e-04
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 44 7e-04
BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein MG... 44 7e-04
BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein. 44 7e-04
AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein. 44 7e-04
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 43 0.001
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 43 0.001
BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein. 42 0.003
BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein. 42 0.003
BC111066-1|AAI11067.1| 294|Homo sapiens RBM25 protein protein. 42 0.003
BC083496-1|AAH83496.1| 257|Homo sapiens RBM25 protein protein. 42 0.003
BC062440-1|AAH62440.1| 245|Homo sapiens RBM25 protein protein. 42 0.003
AK026107-1|BAB15362.1| 430|Homo sapiens protein ( Homo sapiens ... 42 0.003
AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein. 42 0.003
AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2 pro... 42 0.003
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 41 0.003
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 41 0.003
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 41 0.003
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 41 0.003
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 41 0.003
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 41 0.003
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 40 0.006
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 40 0.006
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 40 0.011
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 40 0.011
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 40 0.011
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 40 0.011
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 39 0.014
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 39 0.014
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 39 0.014
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 39 0.014
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 39 0.014
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 39 0.014
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 39 0.014
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 39 0.014
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 39 0.014
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 39 0.014
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 39 0.014
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 39 0.014
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 39 0.014
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 39 0.014
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 39 0.014
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 39 0.014
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 39 0.014
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 39 0.014
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 39 0.014
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 39 0.014
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 39 0.019
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 39 0.019
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 39 0.019
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 39 0.019
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 39 0.019
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 39 0.019
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 39 0.019
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 39 0.019
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 39 0.019
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 39 0.019
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 39 0.019
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 38 0.025
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 38 0.025
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 38 0.025
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 38 0.025
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 38 0.025
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 38 0.025
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 38 0.025
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 38 0.025
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 38 0.025
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 38 0.025
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 38 0.032
AL390039-3|CAI41564.1| 413|Homo sapiens novel protein protein. 38 0.043
AL390039-2|CAC19636.1| 405|Homo sapiens novel protein protein. 38 0.043
AK001878-1|BAA91957.1| 405|Homo sapiens protein ( Homo sapiens ... 38 0.043
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 37 0.057
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 37 0.057
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 37 0.057
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 37 0.057
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 37 0.057
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 37 0.057
BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein. 37 0.057
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 37 0.057
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 37 0.057
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 37 0.057
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 37 0.057
BC006986-1|AAH06986.1| 413|Homo sapiens RNA binding motif prote... 37 0.057
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 37 0.057
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 37 0.057
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 37 0.057
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 37 0.057
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 37 0.057
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 37 0.057
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 37 0.057
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 37 0.057
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 37 0.057
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 37 0.057
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 37 0.057
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 37 0.057
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 37 0.057
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 37 0.057
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 37 0.057
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 37 0.057
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 37 0.057
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 37 0.057
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 37 0.057
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 37 0.057
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 37 0.057
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 37 0.057
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 37 0.057
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 37 0.057
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 37 0.057
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 37 0.057
AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein. 37 0.057
DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein. 37 0.075
BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomeras... 37 0.075
BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomeras... 37 0.075
BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomeras... 37 0.075
AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomeras... 37 0.075
AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomeras... 37 0.075
AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomeras... 37 0.075
AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomeras... 37 0.075
AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomeras... 37 0.075
AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomeras... 37 0.075
AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomera... 37 0.075
AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomera... 37 0.075
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 37 0.075
AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-tra... 37 0.075
AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-tra... 37 0.075
AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein. 37 0.075
AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein. 37 0.075
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 36 0.099
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 36 0.099
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 36 0.099
BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein. 36 0.099
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 36 0.099
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 36 0.099
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 36 0.099
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 36 0.099
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 36 0.099
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 36 0.099
AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic granule-... 36 0.099
X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein. 36 0.13
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 36 0.13
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 36 0.13
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 36 0.13
CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein. 36 0.13
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 36 0.13
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 36 0.13
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 36 0.13
BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation ... 36 0.13
BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation ... 36 0.13
BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation ... 36 0.13
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 36 0.13
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 36 0.13
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 36 0.13
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 36 0.13
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 36 0.13
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 36 0.13
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 36 0.13
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 36 0.13
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 36 0.13
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 36 0.13
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 36 0.13
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 36 0.13
AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation f... 36 0.13
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 36 0.17
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 36 0.17
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 36 0.17
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 36 0.17
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 36 0.17
Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein. 35 0.23
X72990-1|CAA51489.1| 656|Homo sapiens EWS protein. 35 0.23
X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein. 35 0.23
CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. 35 0.23
BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoin... 35 0.23
BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoin... 35 0.23
BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoin... 35 0.23
AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoin... 35 0.23
AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens ... 35 0.23
AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens ... 35 0.23
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 35 0.30
AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation ... 35 0.30
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 34 0.40
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 34 0.40
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 34 0.40
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.40
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 34 0.40
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.40
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 34 0.40
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.40
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 34 0.40
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 34 0.40
U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation in... 34 0.53
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 34 0.53
U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein. 34 0.53
U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein. 34 0.53
U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein. 34 0.53
U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein. 34 0.53
BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation ... 34 0.53
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 34 0.53
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 34 0.53
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 34 0.53
BC012457-1|AAH12457.1| 227|Homo sapiens Similar to nucleolar pr... 34 0.53
BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for IM... 34 0.53
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 34 0.53
BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein. 34 0.53
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 34 0.53
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 34 0.53
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 34 0.53
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 34 0.53
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 34 0.53
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 34 0.53
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 34 0.53
AC004971-1|AAP21880.1| 385|Homo sapiens unknown protein. 34 0.53
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 34 0.53
AB208976-1|BAD92213.1| 279|Homo sapiens arginine/serine-rich sp... 34 0.53
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 34 0.53
BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein. 33 0.92
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 33 0.92
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 33 0.92
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 33 0.92
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 33 0.92
BC034402-1|AAH34402.1| 497|Homo sapiens FLJ20273 protein protein. 33 0.92
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 33 0.92
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 33 0.92
AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein. 33 0.92
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 33 0.92
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 33 0.92
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 33 0.92
AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens ... 33 0.92
AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein pro... 33 0.92
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 33 0.92
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 33 0.92
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 33 0.92
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 33 0.92
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 33 0.92
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 33 1.2
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 33 1.2
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 33 1.2
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 33 1.2
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 33 1.2
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 33 1.2
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 33 1.2
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 33 1.2
BC033838-1|AAH33838.1| 368|Homo sapiens BRUNOL6 protein protein. 33 1.2
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 33 1.2
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 33 1.2
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 33 1.2
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 33 1.2
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 33 1.2
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 33 1.2
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 33 1.2
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 33 1.2
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 33 1.2
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 33 1.2
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 33 1.2
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 33 1.2
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 33 1.2
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 33 1.2
AK131098-1|BAC85148.1| 376|Homo sapiens FLJ00324 protein protein. 33 1.2
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 33 1.2
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 33 1.2
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 33 1.2
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 33 1.2
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 33 1.2
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 33 1.2
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 33 1.2
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 33 1.2
AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein BRU... 33 1.2
AF248649-1|AAF86231.1| 83|Homo sapiens RNA-binding protein BRU... 33 1.2
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 33 1.2
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 33 1.2
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 33 1.2
AB209434-1|BAD92671.1| 305|Homo sapiens BRUNO-like 6 RNA-bindin... 33 1.2
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 33 1.2
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 32 1.6
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 32 1.6
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 32 1.6
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 32 2.1
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 32 2.1
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 32 2.1
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 32 2.1
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 32 2.1
AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein pr... 32 2.1
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 32 2.1
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 32 2.1
BC037565-1|AAH37565.1| 561|Homo sapiens RAVER1 protein protein. 31 2.8
BC012187-1|AAH12187.1| 531|Homo sapiens PHD finger protein 21B ... 31 2.8
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 31 2.8
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 31 2.8
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 31 2.8
L14076-1|AAA36649.1| 494|Homo sapiens pre-mRNA splicing factor ... 31 3.7
BT007415-1|AAP36083.1| 494|Homo sapiens splicing factor, argini... 31 3.7
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 31 3.7
BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein MG... 31 3.7
BC002781-1|AAH02781.1| 494|Homo sapiens splicing factor, argini... 31 3.7
AL590729-1|CAI14326.1| 494|Homo sapiens splicing factor, argini... 31 3.7
AL357500-1|CAH71635.1| 494|Homo sapiens splicing factor, argini... 31 3.7
AK223444-1|BAD97164.1| 382|Homo sapiens splicing factor, argini... 31 3.7
AC004236-1|AAC04476.1| 192|Homo sapiens SRP0001LB protein. 31 3.7
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 31 3.7
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 31 4.9
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 31 4.9
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 31 4.9
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 31 4.9
BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine ass... 31 4.9
BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein. 31 4.9
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 31 4.9
AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine ass... 31 4.9
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 31 4.9
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 31 4.9
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 31 4.9
AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif prote... 31 4.9
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 31 4.9
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein. 31 4.9
AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator p... 31 4.9
AF206328-1|AAL74055.1| 467|Homo sapiens hepatocellular carcinom... 31 4.9
AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming gro... 31 4.9
AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein... 31 4.9
X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein. 30 6.5
X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein. 30 6.5
BX088689-6|CAH73354.1| 796|Homo sapiens YY1 associated protein ... 30 6.5
BX088689-5|CAH73353.1| 868|Homo sapiens YY1 associated protein ... 30 6.5
BX088689-4|CAH73352.1| 750|Homo sapiens YY1 associated protein ... 30 6.5
BX088689-3|CAH73351.1| 719|Homo sapiens YY1 associated protein ... 30 6.5
BX088689-2|CAH73350.1| 739|Homo sapiens YY1 associated protein ... 30 6.5
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 30 6.5
BC044887-1|AAH44887.1| 739|Homo sapiens YY1AP1 protein protein. 30 6.5
BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein. 30 6.5
BC014906-1|AAH14906.1| 750|Homo sapiens YY1 associated protein ... 30 6.5
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 30 6.5
BC009358-1|AAH09358.2| 699|Homo sapiens YY1AP1 protein protein. 30 6.5
BC008766-1|AAH08766.2| 730|Homo sapiens YY1AP1 protein protein. 30 6.5
BC001843-1|AAH01843.2| 739|Homo sapiens YY1 associated protein ... 30 6.5
BC001655-1|AAH01655.2| 739|Homo sapiens YY1 associated protein ... 30 6.5
AY604179-1|AAT34990.1| 750|Homo sapiens YY1-associated protein ... 30 6.5
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 30 6.5
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 30 6.5
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 30 6.5
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 30 6.5
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 30 6.5
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 30 6.5
AL512366-2|CAI14234.1| 201|Homo sapiens APOBEC1 complementation... 30 6.5
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 30 6.5
AL162734-9|CAH71646.1| 796|Homo sapiens YY1 associated protein ... 30 6.5
AL162734-7|CAH71645.1| 868|Homo sapiens YY1 associated protein ... 30 6.5
AL162734-6|CAH71644.1| 750|Homo sapiens YY1 associated protein ... 30 6.5
AL162734-5|CAH71643.1| 719|Homo sapiens YY1 associated protein ... 30 6.5
AL162734-4|CAH71642.1| 739|Homo sapiens YY1 associated protein ... 30 6.5
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 30 6.5
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 30 6.5
AK056850-1|BAB71295.1| 289|Homo sapiens protein ( Homo sapiens ... 30 6.5
AK023976-1|BAB14748.1| 796|Homo sapiens protein ( Homo sapiens ... 30 6.5
AK001737-1|BAA91871.1| 645|Homo sapiens protein ( Homo sapiens ... 30 6.5
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 30 6.5
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 30 6.5
AF466401-1|AAL75971.1| 750|Homo sapiens YY1 associated protein ... 30 6.5
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 30 6.5
AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen ... 30 6.5
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 30 6.5
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 30 6.5
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 30 6.5
AF203474-1|AAO13249.1| 719|Homo sapiens hepatocellular carcinom... 30 6.5
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 30 6.5
AF011407-1|AAB64201.1| 180|Homo sapiens latent TGF beta binding... 30 6.5
D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein. 30 8.6
BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein pr... 30 8.6
BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein. 30 8.6
BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 8.6
BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 8.6
BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma... 30 8.6
BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma... 30 8.6
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 30 8.6
BC039879-1|AAH39879.1| 177|Homo sapiens TRSPAP1 protein protein. 30 8.6
BC036740-1|AAH36740.2| 981|Homo sapiens GON4L protein protein. 30 8.6
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 30 8.6
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 30 8.6
AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein. 30 8.6
AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein. 30 8.6
AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein. 30 8.6
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 30 8.6
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 30 8.6
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 30 8.6
AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 8.6
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 30 8.6
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 30 8.6
AK222851-1|BAD96571.1| 852|Homo sapiens Hypothetical protein DK... 30 8.6
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 30 8.6
AK022985-1|BAB14347.1| 725|Homo sapiens protein ( Homo sapiens ... 30 8.6
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 30 8.6
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 30 8.6
AB232668-1|BAF51560.1| 1543|Homo sapiens YY1AP-related protein3 ... 30 8.6
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 30 8.6
AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1 ... 30 8.6
AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein. 30 8.6
AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma... 30 8.6
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 131 bits (317), Expect = 2e-30
Identities = 60/86 (69%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG-PQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L G P
Sbjct: 42 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPV 101
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+E+PYG+ + PE APE+ISKAVA+LP
Sbjct: 102 IESPYGETISPEDAPESISKAVASLP 127
Score = 109 bits (261), Expect = 1e-23
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+P EARNMLLQNPQLAYALLQAQV+MRIVDP A+ +LH
Sbjct: 126 LPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 185
Query: 429 NPVPPILLPGDKP 467
+P ++ +P
Sbjct: 186 TNIPTLIAGNPQP 198
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 131 bits (317), Expect = 2e-30
Identities = 60/86 (69%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG-PQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L G P
Sbjct: 51 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPV 110
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+E+PYG+ + PE APE+ISKAVA+LP
Sbjct: 111 IESPYGETISPEDAPESISKAVASLP 136
Score = 109 bits (261), Expect = 1e-23
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+P EARNMLLQNPQLAYALLQAQV+MRIVDP A+ +LH
Sbjct: 135 LPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 194
Query: 429 NPVPPILLPGDKP 467
+P ++ +P
Sbjct: 195 TNIPTLIAGNPQP 207
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 131 bits (317), Expect = 2e-30
Identities = 60/86 (69%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG-PQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L G P
Sbjct: 51 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPV 110
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+E+PYG+ + PE APE+ISKAVA+LP
Sbjct: 111 IESPYGETISPEDAPESISKAVASLP 136
Score = 109 bits (261), Expect = 1e-23
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+P EARNMLLQNPQLAYALLQAQV+MRIVDP A+ +LH
Sbjct: 135 LPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 194
Query: 429 NPVPPILLPGDKP 467
+P ++ +P
Sbjct: 195 TNIPTLIAGNPQP 207
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 131 bits (317), Expect = 2e-30
Identities = 60/86 (69%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG-PQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L G P
Sbjct: 51 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPV 110
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+E+PYG+ + PE APE+ISKAVA+LP
Sbjct: 111 IESPYGETISPEDAPESISKAVASLP 136
Score = 109 bits (261), Expect = 1e-23
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+P EARNMLLQNPQLAYALLQAQV+MRIVDP A+ +LH
Sbjct: 135 LPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 194
Query: 429 NPVPPILLPGDKP 467
+P ++ +P
Sbjct: 195 TNIPTLIAGNPQP 207
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 131 bits (317), Expect = 2e-30
Identities = 60/86 (69%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG-PQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L G P
Sbjct: 51 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPV 110
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+E+PYG+ + PE APE+ISKAVA+LP
Sbjct: 111 IESPYGETISPEDAPESISKAVASLP 136
Score = 109 bits (261), Expect = 1e-23
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+P EARNMLLQNPQLAYALLQAQV+MRIVDP A+ +LH
Sbjct: 135 LPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 194
Query: 429 NPVPPILLPGDKP 467
+P ++ +P
Sbjct: 195 TNIPTLIAGNPQP 207
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 131 bits (317), Expect = 2e-30
Identities = 60/86 (69%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG-PQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L G P
Sbjct: 50 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPV 109
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+E+PYG+ + PE APE+ISKAVA+LP
Sbjct: 110 IESPYGETISPEDAPESISKAVASLP 135
Score = 109 bits (261), Expect = 1e-23
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+P EARNMLLQNPQLAYALLQAQV+MRIVDP A+ +LH
Sbjct: 134 LPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 193
Query: 429 NPVPPILLPGDKP 467
+P ++ +P
Sbjct: 194 TNIPTLIAGNPQP 206
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 131 bits (317), Expect = 2e-30
Identities = 60/86 (69%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG-PQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L G P
Sbjct: 51 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPV 110
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+E+PYG+ + PE APE+ISKAVA+LP
Sbjct: 111 IESPYGETISPEDAPESISKAVASLP 136
Score = 109 bits (261), Expect = 1e-23
Identities = 49/73 (67%), Positives = 59/73 (80%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+P EARNMLLQNPQLAYALLQAQV+MRIVDP A+ +LH
Sbjct: 135 LPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQ 194
Query: 429 NPVPPILLPGDKP 467
+P ++ +P
Sbjct: 195 TNIPTLIAGNPQP 207
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 131 bits (316), Expect = 3e-30
Identities = 58/86 (67%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL-MQGPQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L P
Sbjct: 51 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPI 110
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+++PYGDP++PE APE+I++AVA+LP
Sbjct: 111 IDSPYGDPIDPEDAPESITRAVASLP 136
Score = 103 bits (247), Expect = 6e-22
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+ EARNMLLQNPQLAYALLQAQV+MRI+DP A+ +LH
Sbjct: 135 LPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRK 194
Query: 429 NPVPPILLPG 458
V P L+PG
Sbjct: 195 IHVTP-LIPG 203
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 131 bits (316), Expect = 3e-30
Identities = 58/86 (67%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL-MQGPQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L P
Sbjct: 51 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPI 110
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+++PYGDP++PE APE+I++AVA+LP
Sbjct: 111 IDSPYGDPIDPEDAPESITRAVASLP 136
Score = 103 bits (247), Expect = 6e-22
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+ EARNMLLQNPQLAYALLQAQV+MRI+DP A+ +LH
Sbjct: 135 LPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRK 194
Query: 429 NPVPPILLPG 458
V P L+PG
Sbjct: 195 IHVTP-LIPG 203
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 131 bits (316), Expect = 3e-30
Identities = 58/86 (67%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL-MQGPQ 177
RETGKPKGYGFCEY+DQETALSAMRNLNG E GR+LRVDNA +EK++ E+++L P
Sbjct: 51 RETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPI 110
Query: 178 VENPYGDPVEPEKAPEAISKAVATLP 255
+++PYGDP++PE APE+I++AVA+LP
Sbjct: 111 IDSPYGDPIDPEDAPESITRAVASLP 136
Score = 103 bits (247), Expect = 6e-22
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+ EARNMLLQNPQLAYALLQAQV+MRI+DP A+ +LH
Sbjct: 135 LPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRK 194
Query: 429 NPVPPILLPG 458
V P L+PG
Sbjct: 195 IHVTP-LIPG 203
>AB014589-1|BAA31664.1| 547|Homo sapiens KIAA0689 protein protein.
Length = 547
Score = 103 bits (247), Expect = 6e-22
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +3
Query: 249 IAPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 428
+ PEQMFELMKQMKLC+QN+ EARNMLLQNPQLAYALLQAQV+MRI+DP A+ +LH
Sbjct: 66 LPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRK 125
Query: 429 NPVPPILLPG 458
V P L+PG
Sbjct: 126 IHVTP-LIPG 134
Score = 88.6 bits (210), Expect = 2e-17
Identities = 40/67 (59%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 ALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL-MQGPQVENPYGDPVEPEKAPEAIS 234
ALSAMRNLNG E GR+LRVDNA +EK++ E+++L P +++PYGDP++PE APE+I+
Sbjct: 1 ALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDPEDAPESIT 60
Query: 235 KAVATLP 255
+AVA+LP
Sbjct: 61 RAVASLP 67
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 50.0 bits (114), Expect = 8e-06
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 183
ETG+ KGYGF + D E A A+ LNG+E+ GR ++V + + + ++E
Sbjct: 286 ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 345
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 50.0 bits (114), Expect = 8e-06
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 183
ETG+ KGYGF + D E A A+ LNG+E+ GR ++V + + + ++E
Sbjct: 286 ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 345
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 50.0 bits (114), Expect = 8e-06
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 183
ETG+ KGYGF + D E A A+ LNG+E+ GR ++V + + + ++E
Sbjct: 286 ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 345
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 50.0 bits (114), Expect = 8e-06
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 183
ETG+ KGYGF + D E A A+ LNG+E+ GR ++V + + + ++E
Sbjct: 264 ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 323
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 50.0 bits (114), Expect = 8e-06
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 183
ETG+ KGYGF + D E A A+ LNG+E+ GR ++V + + + ++E
Sbjct: 286 ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 345
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 50.0 bits (114), Expect = 8e-06
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 183
ETG+ KGYGF + D E A A+ LNG+E+ GR ++V + + + ++E
Sbjct: 286 ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELE 345
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 49.2 bits (112), Expect = 1e-05
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKS 141
ETG+ KGYGF + D E A A+ LNG+E+ GR ++V + TE++
Sbjct: 129 ETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHV-TERT 173
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 48.4 bits (110), Expect = 2e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
+TG+ KGYGF + D E A A+ LNG+E+ GR +RV + TE+
Sbjct: 283 DTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHV-TER 326
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 48.4 bits (110), Expect = 2e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
+TG+ KGYGF + D E A A+ LNG+E+ GR +RV + TE+
Sbjct: 283 DTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHV-TER 326
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 48.4 bits (110), Expect = 2e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
+TG+ KGYGF + D E A A+ LNG+E+ GR +RV + TE+
Sbjct: 265 DTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHV-TER 308
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 48.4 bits (110), Expect = 2e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
+TG+ KGYGF + D E A A+ LNG+E+ GR +RV + TE+
Sbjct: 277 DTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHV-TER 320
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 46.0 bits (104), Expect = 1e-04
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
+TG+ KGYG + D E A A+ LNG+E+ GR +RV + TE+
Sbjct: 283 DTGRSKGYGLITFSDSECARRALEQLNGFELAGRPMRVGHV-TER 326
>BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein.
Length = 173
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
++TGK KG+ F Y+DQ + + A+ N NG +I GR++RVD+ ++ + + +
Sbjct: 71 KKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEI 124
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
++TGK KG+ F Y+DQ + + A+ N NG +I GR++RVD+ ++ + + +
Sbjct: 71 KKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEI 124
>BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for
IMAGE:3686686) protein.
Length = 163
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
++TGK KG+ F Y+DQ + + A+ N NG +I GR++RVD+ ++ + + +
Sbjct: 71 KKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEI 124
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
++TGK KG+ F Y+DQ + + A+ N NG +I GR++RVD+ ++ + + +
Sbjct: 71 KKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEI 124
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
++TGK KG+ F Y+DQ + + A+ N NG +I GR++RVD+ ++ + + +
Sbjct: 71 KKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEI 124
>AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein.
Length = 351
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
++TGK KG+ F Y+DQ + + A+ N NG +I GR++RVD+ ++ + + +
Sbjct: 71 KKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEI 124
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 245 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 286
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 148 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 184
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 263 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 304
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 166 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 202
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 220 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 261
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 123 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 159
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 220 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 261
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 123 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 159
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 203 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 244
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 106 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 142
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 246 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 287
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 149 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 185
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 246 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 287
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 149 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 185
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 260 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 301
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 163 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 199
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 45.6 bits (103), Expect = 2e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACT 132
TGK KGYGF EY+ +++ A+ ++N +++GG+ LRV A T
Sbjct: 263 TGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVT 304
Score = 35.1 bits (77), Expect = 0.23
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+ F EY+ E A A+ +N +GGR+++V
Sbjct: 166 TMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 202
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 43.6 bits (98), Expect = 7e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET + +G+GF + + E A AMR +NG + GR +RVD+A
Sbjct: 41 RETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
>BC031682-1|AAH31682.1| 450|Homo sapiens RBM42 protein protein.
Length = 450
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
+ TGK KGYGF +KD + AMR +NG +G R +++
Sbjct: 386 KRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSRPIKL 424
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 43.6 bits (98), Expect = 7e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET + +G+GF + + E A AMR +NG + GR +RVD+A
Sbjct: 41 RETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
>BC004204-1|AAH04204.1| 480|Homo sapiens hypothetical protein
MGC10433 protein.
Length = 480
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
+ TGK KGYGF +KD + AMR +NG +G R +++
Sbjct: 416 KRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSRPIKL 454
>BC002868-1|AAH02868.1| 451|Homo sapiens MGC10433 protein protein.
Length = 451
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
+ TGK KGYGF +KD + AMR +NG +G R +++
Sbjct: 387 KRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSRPIKL 425
>AC002115-1|AAB57629.1| 339|Homo sapiens F25451_2 protein.
Length = 339
Score = 43.6 bits (98), Expect = 7e-04
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
+ TGK KGYGF +KD + AMR +NG +G R +++
Sbjct: 275 KRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSRPIKL 313
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGP 174
TG KGY FCEY D A+ LNG ++G + L V A + + Q P
Sbjct: 296 TGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTP 351
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGP 174
TG KGY FCEY D A+ LNG ++G + L V A + + Q P
Sbjct: 296 TGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTP 351
>BC113391-1|AAI13392.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME 150
+GK + +GFCEYK+ E+ L A+R L+ +IG + L V K++++
Sbjct: 119 SGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLD 166
>BC113389-1|AAI13390.1| 839|Homo sapiens RBM25 protein protein.
Length = 839
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME 150
+GK + +GFCEYK+ E+ L A+R L+ +IG + L V K++++
Sbjct: 119 SGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLD 166
>BC111066-1|AAI11067.1| 294|Homo sapiens RBM25 protein protein.
Length = 294
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME 150
+GK + +GFCEYK+ E+ L A+R L+ +IG + L V K++++
Sbjct: 123 SGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLD 170
>BC083496-1|AAH83496.1| 257|Homo sapiens RBM25 protein protein.
Length = 257
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME 150
+GK + +GFCEYK+ E+ L A+R L+ +IG + L V K++++
Sbjct: 80 SGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLD 127
>BC062440-1|AAH62440.1| 245|Homo sapiens RBM25 protein protein.
Length = 245
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME 150
+GK + +GFCEYK+ E+ L A+R L+ +IG + L V K++++
Sbjct: 77 SGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLD 124
>AK026107-1|BAB15362.1| 430|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22454 fis, clone HRC09703. ).
Length = 430
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME 150
+GK + +GFCEYK+ E+ L A+R L+ +IG + L V K++++
Sbjct: 123 SGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLD 170
>AF109907-1|AAC97961.1| 735|Homo sapiens S164 protein.
Length = 735
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME 150
+GK + +GFCEYK+ E+ L A+R L+ +IG + L V K++++
Sbjct: 15 SGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLD 62
>AC004858-3|AAF19255.1| 784|Homo sapiens WUGSC:H_DJ0687K01.2
protein.
Length = 784
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME 150
+GK + +GFCEYK+ E+ L A+R L+ +IG + L V K++++
Sbjct: 64 SGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLD 111
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET + +G+GF +++ + A AM +NG + GR +RVD A
Sbjct: 41 RETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET + +G+GF +++ + A AM +NG + GR +RVD A
Sbjct: 41 RETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET + +G+GF +++ + A AM +NG + GR +RVD A
Sbjct: 41 RETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET + +G+GF +++ + A AM +NG + GR +RVD A
Sbjct: 41 RETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET + +G+GF +++ + A AM +NG + GR +RVD A
Sbjct: 41 RETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 41.1 bits (92), Expect = 0.003
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET + +G+GF +++ + A AM +NG + GR +RVD A
Sbjct: 41 RETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 40.3 bits (90), Expect = 0.006
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG KGY FCEY D A+ LNG ++G + L V A
Sbjct: 296 TGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRA 335
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ GK KGY F E+ E A A+ + N EIGGR++R++
Sbjct: 495 QNGKSKGYAFIEFASFEDAKEALNSCNKREIGGRAIRLE 533
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
RETG KG+GF ++ +E A +A + EI G + +D
Sbjct: 581 RETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLD 620
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 39.5 bits (88), Expect = 0.011
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG 171
+ TG+ +G+ F ++ + + AM NG E+ GR +RVD + T+++ + G
Sbjct: 154 QRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMG 210
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 39.5 bits (88), Expect = 0.011
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG 171
+ TG+ +G+ F ++ + + AM NG E+ GR +RVD + T+++ + G
Sbjct: 154 QRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMG 210
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 39.5 bits (88), Expect = 0.011
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG 171
+ TG+ +G+ F ++ + + AM NG E+ GR +RVD + T+++ + G
Sbjct: 154 QRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMG 210
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 39.5 bits (88), Expect = 0.011
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG 171
+ TG+ +G+ F ++ + + AM NG E+ GR +RVD + T+++ + G
Sbjct: 154 QRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMG 210
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ +GKP+GY F EY+ + SA ++ +G +I GR + VD
Sbjct: 138 KRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 177
>X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for
hU1-70K snRNP protein (RNP8). ).
Length = 301
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ +GKP+GY F EY+ + SA ++ +G +I GR + VD
Sbjct: 89 KRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 128
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ +GKP+GY F EY+ + SA ++ +G +I GR + VD
Sbjct: 315 KRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 354
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen
protein.
Length = 428
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ +GKP+GY F EY+ + SA ++ +G +I GR + VD
Sbjct: 138 KRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 177
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ +GKP+GY F EY+ + SA ++ +G +I GR + VD
Sbjct: 138 KRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 177
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ +GKP+GY F EY+ + SA ++ +G +I GR + VD
Sbjct: 138 KRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 177
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 39 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 85
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 139 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 185
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear
ribonucleoprotein 70kDa polypeptide (RNP antigen)
protein.
Length = 437
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ +GKP+GY F EY+ + SA ++ +G +I GR + VD
Sbjct: 138 KRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 177
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 7 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 53
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 107 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 153
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
GK KG+GF Y+ E A A+ +NG EI G+ + V A + ++E QA
Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA---QKKVERQA 274
Score = 33.9 bits (74), Expect = 0.53
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGY F ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGAKAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVATL 252
G+ V+ E E S+ TL
Sbjct: 197 NFGEEVDDESLKELFSQFGKTL 218
Score = 33.1 bits (72), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 144
E G+ KG+GF + E A A+ +NG +G + L V A ++ R
Sbjct: 328 EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 201 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 241
Score = 35.1 bits (77), Expect = 0.23
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME------MQALM 165
E G+ KG+GF + E A A+ +NG + + L V A ++ R MQ +
Sbjct: 303 EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMA 362
Query: 166 QGPQVENPYGDPVEPEKAPEAISKAVATLPQNR 264
V NP +P +P AP + +A +PQ +
Sbjct: 363 SVRAVPNPVINPYQP--APPS-GYFIAAIPQTQ 392
Score = 33.5 bits (73), Expect = 0.70
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGYGF ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 113 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGARAKEFTNVYIK 171
Query: 193 --GDPVEPEKAPEAISK 237
G+ ++ E+ + K
Sbjct: 172 NFGEDMDDERLKDLFGK 188
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 223 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 263
Score = 35.1 bits (77), Expect = 0.23
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME------MQALM 165
E G+ KG+GF + E A A+ +NG + + L V A ++ R MQ +
Sbjct: 325 EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMA 384
Query: 166 QGPQVENPYGDPVEPEKAPEAISKAVATLPQNR 264
V NP +P +P P A QNR
Sbjct: 385 SVRAVPNPVINPYQP-APPSGYFMAAIPQTQNR 416
Score = 33.5 bits (73), Expect = 0.70
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGYGF ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGARAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISKAVA 246
G+ ++ E+ + A++
Sbjct: 197 NFGEDMDDERLKDLFGPALS 216
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME------MQALM 165
E G+ KG+GF + E A A+ +NG + + L V A ++ R MQ +
Sbjct: 328 EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMA 387
Query: 166 QGPQVENPYGDPVEPEKAPEAISKAVATLPQNR 264
V NP +P +P P A QNR
Sbjct: 388 SVRAVPNPVINPYQP-APPSGYFMAAIPQTQNR 419
Score = 33.5 bits (73), Expect = 0.70
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGYGF ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGARAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISK 237
G+ ++ E+ + K
Sbjct: 197 NFGEDMDDERLKDLFGK 213
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENP--- 189
KGYGF ++ E A A++ +NG + GR + V KSR E +A + E P
Sbjct: 138 KGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQF---KSRKEREAELGARAKEFPNVY 194
Query: 190 ---YGDPVEPEKAPEAISK 237
+G+ ++ E+ + K
Sbjct: 195 IKNFGEDMDDERLKDLFGK 213
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENP--- 189
KGYGF ++ E A A++ +NG + GR + V KSR E +A + E P
Sbjct: 138 KGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQF---KSRKEREAELGARAKEFPNVY 194
Query: 190 ---YGDPVEPEKAPEAISK 237
+G+ ++ E+ + K
Sbjct: 195 IKNFGEDMDDERLKDLFGK 213
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME------MQALM 165
E G+ KG+GF + E A A+ +NG + + L V A ++ R MQ +
Sbjct: 328 EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMA 387
Query: 166 QGPQVENPYGDPVEPEKAPEAISKAVATLPQNR 264
V NP +P +P P A QNR
Sbjct: 388 SVRAVPNPVINPYQP-APPSGYFMAAIPQTQNR 419
Score = 33.5 bits (73), Expect = 0.70
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGYGF ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGARAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISK 237
G+ ++ E+ + K
Sbjct: 197 NFGEDMDDERLKDLFGK 213
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENP--- 189
KGYGF ++ E A A++ +NG + GR + V KSR E +A + E P
Sbjct: 138 KGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQF---KSRKEREAELGARAKEFPNVY 194
Query: 190 ---YGDPVEPEKAPEAISK 237
+G+ ++ E+ + K
Sbjct: 195 IKNFGEDMDDERLKDLFGK 213
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME------MQALM 165
E G+ KG+GF + E A A+ +NG + + L V A ++ R MQ +
Sbjct: 328 EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMA 387
Query: 166 QGPQVENPYGDPVEPEKAPEAISKAVATLPQNR 264
V NP +P +P P A QNR
Sbjct: 388 SVRAVPNPVINPYQP-APPSGYFMAAIPQTQNR 419
Score = 33.5 bits (73), Expect = 0.70
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGYGF ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGARAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISK 237
G+ ++ E+ + K
Sbjct: 197 NFGEDMDDERLKDLFGK 213
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRME------MQALM 165
E G+ KG+GF + E A A+ +NG + + L V A ++ R MQ +
Sbjct: 328 EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMA 387
Query: 166 QGPQVENPYGDPVEPEKAPEAISKAVATLPQNR 264
V NP +P +P P A QNR
Sbjct: 388 SVRAVPNPVINPYQP-APPSGYFMAAIPQTQNR 419
Score = 33.5 bits (73), Expect = 0.70
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY-- 192
KGYGF ++ QE A A+ +NG + R + V + K R E + + + N Y
Sbjct: 138 KGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER-EAELGARAKEFTNVYIK 196
Query: 193 --GDPVEPEKAPEAISK 237
G+ ++ E+ + K
Sbjct: 197 NFGEDMDDERLKDLFGK 213
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENP--- 189
KGYGF ++ E A A++ +NG + GR + V KSR E +A + E P
Sbjct: 138 KGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQF---KSRKEREAELGARAKEFPNVY 194
Query: 190 ---YGDPVEPEKAPEAISK 237
+G+ ++ E+ + K
Sbjct: 195 IKNFGEDMDDERLKDLFGK 213
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E+GK KG+GF ++ E A A+ +NG E+ G+ + V A
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRA 266
Score = 35.1 bits (77), Expect = 0.23
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +1
Query: 19 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENP--- 189
KGYGF ++ E A A++ +NG + GR + V KSR E +A + E P
Sbjct: 138 KGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQF---KSRKEREAELGARAKEFPNVY 194
Query: 190 ---YGDPVEPEKAPEAISK 237
+G+ ++ E+ + K
Sbjct: 195 IKNFGEDMDDERLKDLFGK 213
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+R+LNGY +G R L+V
Sbjct: 300 TNKCKGFGFVTMTNYDEAAMAIRSLNGYRLGDRVLQV 336
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+R+LNGY +G R L+V
Sbjct: 313 TNKCKGFGFVTMTNYDEAAMAIRSLNGYRLGDRVLQV 349
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ +N ++ G+ +RV+ A +++ A
Sbjct: 48 RVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA 100
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ +N ++ G+ +RV+ A +++ A
Sbjct: 48 RVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA 100
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ +N ++ G+ +RV+ A +++ A
Sbjct: 48 RVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA 100
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ +N ++ G+ +RV+ A +++ A
Sbjct: 48 RVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA 100
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ +N ++ G+ +RV+ A +++ A
Sbjct: 48 RVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA 100
>AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ +N ++ G+ +RV+ A +++ A
Sbjct: 5 RVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA 57
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ +N ++ G+ +RV+ A +++ A
Sbjct: 48 RVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA 100
>AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 38.3 bits (85), Expect = 0.025
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ +N ++ G+ +RV+ A +++ A
Sbjct: 5 RVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGA 57
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 37.9 bits (84), Expect = 0.032
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV-DNACTEKSRMEMQ 156
GK +G G E+KD+E A+ +N Y++ GR L + ++ E +R +Q
Sbjct: 158 GKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNIKEDPDGENARRALQ 207
>AL390039-3|CAI41564.1| 413|Homo sapiens novel protein protein.
Length = 413
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
TG+ +G F + ++E A A+ +NGY++ G+ L ++ +K R +QA
Sbjct: 346 TGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGKNKKQRSNLQA 396
>AL390039-2|CAC19636.1| 405|Homo sapiens novel protein protein.
Length = 405
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
TG+ +G F + ++E A A+ +NGY++ G+ L ++ +K R +QA
Sbjct: 346 TGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGKNKKQRSNLQA 396
>AK001878-1|BAA91957.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ11016 fis, clone PLACE1003334. ).
Length = 405
Score = 37.5 bits (83), Expect = 0.043
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
TG+ +G F + ++E A A+ +NGY++ G+ L ++ +K R +QA
Sbjct: 346 TGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGKNKKQRSNLQA 396
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ GK KGY F E+ E A A+ + N EI GR++R++
Sbjct: 518 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 556
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
RETG KG+GF ++ +E A AM + EI G + +D
Sbjct: 604 RETGSSKGFGFVDFNSEEDAKEAMED---GEIDGNKVTLD 640
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 108 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 147
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 108 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 147
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRM 147
+GK KG+GF Y+ E A A+ +L+G I G+ L V A + R+
Sbjct: 235 SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERL 281
>BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein.
Length = 606
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
TG+ KGYGF EY +++A A +L G +G R+L V
Sbjct: 169 TGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYV 205
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
+ G+ KG+ EY+ E A A + +G +GG LRV
Sbjct: 257 QDGQLKGFAVLEYETAEMAEEAQQQADGLSLGGSHLRV 294
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 108 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 147
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
TGK KGYGF + ++ A +A++ + G +GGR +R N T K
Sbjct: 143 TGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT-NWATRK 185
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>BC006986-1|AAH06986.1| 413|Homo sapiens RNA binding motif protein
41 protein.
Length = 413
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
TG+ +G F + ++E A A+ +NGY++ G+ L ++ +K R +QA
Sbjct: 346 TGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGKNKKQRSNLQA 396
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ GK KGY F E+ E A A+ + N EI GR++R++
Sbjct: 290 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 328
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
RETG KG+GF ++ +E A +A + EI G + +D
Sbjct: 376 RETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLD 415
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSL 111
E GK KG + E+K + A G EI GRS+
Sbjct: 196 EDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 231
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ GK KGY F E+ E A A+ + N EI GR++R++
Sbjct: 290 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 328
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
RETG KG+GF ++ +E A +A + EI G + +D
Sbjct: 376 RETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLD 415
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSL 111
E GK KG + E+K + A G EI GRS+
Sbjct: 196 EDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 231
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ GK KGY F E+ E A A+ + N EI GR++R++
Sbjct: 290 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 328
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
RETG KG+GF ++ +E A +A + EI G + +D
Sbjct: 376 RETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLD 415
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSL 111
E GK KG + E+K + A G EI GRS+
Sbjct: 196 EDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 231
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRM 147
+GK KG+GF Y+ E A A+ +L+G I G+ L V A + R+
Sbjct: 71 SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERL 117
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRM 147
+GK KG+GF Y+ E A A+ +L+G I G+ L V A + R+
Sbjct: 235 SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERL 281
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRM 147
+GK KG+GF Y+ E A A+ +L+G I G+ L V A + R+
Sbjct: 220 SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERL 266
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ GK KGY F E+ E A A+ + N EI GR++R++
Sbjct: 411 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 449
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
RETG KG+GF ++ +E A +A + EI G + +D
Sbjct: 497 RETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLD 536
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
GK +G G E+KD+E A+ +N Y++ GR L +
Sbjct: 138 GKSRGCGVVEFKDEEFVKKALETMNKYDLSGRPLNI 173
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRM 147
+GK KG+GF Y+ E A A+ +L+G I G+ L V A + R+
Sbjct: 235 SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERL 281
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 108 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 147
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 108 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 147
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQV 180
RET K +G+ F ++ A +A+R++NG + G++++V A ++ ++ +GP
Sbjct: 37 RETNKSRGFAFVTFESPADAKAAVRDMNGKSLDGKAIKVAQA----TKPAFESSRRGPPP 92
Query: 181 ENPYGDP 201
G P
Sbjct: 93 PRSRGRP 99
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 37.1 bits (82), Expect = 0.057
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RET K +G+ F ++ A A R++NG + G++++V+ A
Sbjct: 43 RETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 92 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 131
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 107 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 146
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 107 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 146
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 92 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 131
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A +AM LNG ++ G+ + VD
Sbjct: 108 RRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPISVD 147
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
+ GK KGY F E+ E A A+ + N EI GR++R++
Sbjct: 518 QNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 556
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
RETG KG+GF ++ +E A +A + EI G + +D
Sbjct: 604 RETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLD 643
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
TGK KGYGF + ++ A +A++ + G +GGR +R N T K
Sbjct: 143 TGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT-NWATRK 185
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 37.1 bits (82), Expect = 0.057
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
TGK KGYGF + ++ A +A++ + G +GGR +R N T K
Sbjct: 181 TGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT-NWATRK 223
>AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein.
Length = 384
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
TG+ KGYGF EY +++A A +L G +G R+L V
Sbjct: 90 TGQSKGYGFAEYMKKDSAARAKSDLLGKPLGPRTLYV 126
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
+ G+ KG+ EY+ E A A + +G +GG LRV
Sbjct: 178 QDGQLKGFAVLEYETAEMAEEAQQQADGLSLGGSHLRV 215
>DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein.
Length = 314
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 314
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 314
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomerase
E (cyclophilin E) protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomerase
E (cyclophilin E) protein.
Length = 314
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 36.7 bits (81), Expect = 0.075
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV-DNACTEKSRMEMQ 156
GK +G G E+KD+E A+ +N Y++ GR + + ++ E +R +Q
Sbjct: 85 GKSRGCGVVEFKDEEFVKKALETMNKYDLSGRRVNIKEDPDGENARRALQ 134
>AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-trans
isomerase E protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-trans
isomerase E protein.
Length = 301
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein.
Length = 296
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein.
Length = 301
Score = 36.7 bits (81), Expect = 0.075
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
ET K +G+ F E++ E A +A+ N+N E+ GR++RV+ A
Sbjct: 42 ETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
TGK KGYGF + ++ A +A+ ++ G +GGR +R N T K
Sbjct: 134 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT-NWATRK 176
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
TGK KGYGF + ++ A +A+ ++ G +GGR +R N T K
Sbjct: 95 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT-NWATRK 137
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQV 180
RET K +G+ F ++ A +A R++NG + G++++V A ++ ++ +GP
Sbjct: 43 RETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQA----TKPAFESSRRGPPP 98
Query: 181 ENPYGDP 201
G P
Sbjct: 99 PRSRGRP 105
>BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein.
Length = 252
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
TGK KGYGF + ++ A +A+ ++ G +GGR +R N T K
Sbjct: 11 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT-NWATRK 53
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 36.3 bits (80), Expect = 0.099
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
GK +G+GF ++K+ A A++ +N EI GR++ VD A + + Q++
Sbjct: 151 GKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWAVAKDKYKDTQSV 201
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
TGK KGYGF + ++ A +A+ ++ G +GGR +R N T K
Sbjct: 134 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT-NWATRK 176
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 36.3 bits (80), Expect = 0.099
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQA 159
R TG+ +GYGF E+ +E A A++ ++ ++ G+ +RV+ A +++ A
Sbjct: 48 RVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHNKNLDVGA 100
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 36.3 bits (80), Expect = 0.099
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
GK +G+GF ++K+ A A++ +N EI GR++ VD A + + Q++
Sbjct: 151 GKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWAVAKDKYKDTQSV 201
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 36.3 bits (80), Expect = 0.099
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 10 GKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 162
GK +G+GF ++K+ A A++ +N EI GR++ VD A + + Q++
Sbjct: 151 GKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDWAVAKDKYKDTQSV 201
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQV 180
RET K +G+ F ++ A +A R++NG + G++++V A ++ ++ +GP
Sbjct: 43 RETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQA----TKPAFESSRRGPPP 98
Query: 181 ENPYGDP 201
G P
Sbjct: 99 PRSRGRP 105
>AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic
granule-associated RNA-binding protein-like 1 isoform 2
variant protein.
Length = 183
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 138
TGK KGYGF + ++ A +A+ ++ G +GGR +R N T K
Sbjct: 13 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRKIRT-NWATRK 55
>X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 RETGKP---KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RE P KG+G+ E++D ++ LSA+ +LN +G R +RVD A
Sbjct: 128 REPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNRRIRVDVA 171
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + E A A+ +LNGY +G + L+V
Sbjct: 281 TNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQV 317
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 334 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 370
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 13 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA-CTEKSRMEMQALMQ 168
K K Y F ++D+ A+ AM +NG EI G + + A +K R E QA Q
Sbjct: 334 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQ 386
>CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 RETGKP---KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RE P KG+G+ E++D ++ LSA+ +LN +G R +RVD A
Sbjct: 128 REPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNRRIRVDVA 171
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 13 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA-CTEKSRMEMQALMQ 168
K K Y F ++D+ A+ AM +NG EI G + + A +K R E QA Q
Sbjct: 352 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQ 404
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + E A A+ +LNGY +G + L+V
Sbjct: 281 TNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQV 317
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 13 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA-CTEKSRMEMQALMQ 168
K K Y F ++D+ A+ AM +NG EI G + + A +K R E QA Q
Sbjct: 346 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQ 398
>BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 RETGKP---KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RE P KG+G+ E++D ++ LSA+ +LN +G R +RVD A
Sbjct: 128 REPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNRRIRVDVA 171
>BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 RETGKP---KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RE P KG+G+ E++D ++ LSA+ +LN +G R +RVD A
Sbjct: 128 REPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNRRIRVDVA 171
>BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 RETGKP---KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RE P KG+G+ E++D ++ LSA+ +LN +G R +RVD A
Sbjct: 128 REPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNRRIRVDVA 171
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 320 TNKCKGFGFVTMTNYDEAAMAITSLNGYRLGDRVLQV 356
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 300 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 336
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + E A A+ +LNGY +G + L+V
Sbjct: 281 TNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQV 317
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 13 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA-CTEKSRMEMQALMQ 168
K K Y F ++D+ A+ AM +NG EI G + + A +K R E QA Q
Sbjct: 375 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQ 427
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 334 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 370
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 320 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 356
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 337 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 373
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 100 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 139
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 320 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 356
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 339 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 375
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 88 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 127
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 325 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 361
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 88 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 127
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 334 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 370
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 320 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 356
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 337 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 373
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 100 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 139
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 320 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 356
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 339 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 375
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 88 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 127
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 325 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 361
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 88 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 127
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 334 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 370
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 320 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 356
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 337 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 373
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 100 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 139
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 320 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 356
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 83 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 341 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 377
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 104 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 143
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 313 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 349
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 300 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 336
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 76 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 13 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA-CTEKSRMEMQALMQ 168
K K Y F ++D+ A+ AM +NG EI G + + A +K R E QA Q
Sbjct: 375 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQ 427
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 13 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA-CTEKSRMEMQALMQ 168
K K Y F ++D+ A+ AM +NG EI G + + A +K R E QA Q
Sbjct: 372 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQ 424
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 13 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA-CTEKSRMEMQALMQ 168
K K Y F ++D+ A+ AM +NG EI G + + A +K R E QA Q
Sbjct: 372 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQ 424
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 321 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV 357
Score = 33.9 bits (74), Expect = 0.53
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D + A A+ LNG + ++++V A
Sbjct: 84 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 123
>AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation
factor 4B protein.
Length = 611
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 RETGKP---KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RE P KG+G+ E++D ++ LSA+ +LN +G R +RVD A
Sbjct: 128 REPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNRRIRVDVA 171
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 304 TNKCKGFGFMTMTNYDEAAMAIASLNGYRLGQRVLQV 340
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D A A+ LNG ++ ++++V A
Sbjct: 67 TGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 106
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
R TG KGY EY+ + A + M LNG ++ G+ + VD
Sbjct: 108 RRTGYLKGYTLVEYETYKEAQAVMEGLNGQDLMGQPISVD 147
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 321 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQV 357
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D A A+ LNG ++ ++++V A
Sbjct: 76 TGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 314 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQV 350
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D A A+ LNG ++ ++++V A
Sbjct: 76 TGRDLGYGFVNYPDPNDADKAINTLNGLKLQTKTIKVSYA 115
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY +G R L+V
Sbjct: 272 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQV 308
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D A A+ LNG ++ ++++V A
Sbjct: 27 TGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 66
>Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 404 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 445
>X72990-1|CAA51489.1| 656|Homo sapiens EWS protein.
Length = 656
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 404 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 445
>X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 404 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 445
>CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein.
Length = 655
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 403 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 444
>BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 403 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 444
>BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 403 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 444
>BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 404 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 445
>AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 404 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 445
>AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32119 fis, clone PEBLM1000034, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 600
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 348 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 389
>AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 661
Score = 35.1 bits (77), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
+ETGKPKG Y+D TA +A+ +G + G L+V A
Sbjct: 409 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLA 450
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
TG+ GYGF Y D A A+ LNG ++ ++++V A
Sbjct: 76 TGRDLGYGFVNYPDPNDADKAINTLNGLKLQTKTIKVSYA 115
Score = 33.1 bits (72), Expect = 0.92
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
T K KG+GF + + A A+ +LNGY + R L+V
Sbjct: 313 TNKCKGFGFVTMTNYDEAAMAIASLNGYRLAERVLQV 349
>AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B variant protein.
Length = 611
Score = 34.7 bits (76), Expect = 0.30
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +1
Query: 1 RETGKP---KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
RE P KG+G+ E++D ++ LSA+ +LN +G + +RVD A
Sbjct: 128 REPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 171
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
TG KGY F EYK++ + A R+ +G I + VD
Sbjct: 88 TGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVD 125
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
TG KGY F EYK++ + A R+ +G I + VD
Sbjct: 88 TGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVD 125
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
TG KGY F EYK++ + A R+ +G I + VD
Sbjct: 93 TGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVD 130
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
TG KGY F EYK++ + A R+ +G I + VD
Sbjct: 93 TGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVD 130
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
TG KGY F EYK++ + A R+ +G I + VD
Sbjct: 88 TGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVD 125
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
TG KGY F EYK++ + A R+ +G I + VD
Sbjct: 93 TGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVD 130
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.40
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 22 GYGFCEYKDQETALSAMRNLNG-YEIGGRSLRVDNACTEKSR 144
GY F +Y DQ A+ A+ L+G E+ G+ + VD + ++K R
Sbjct: 38 GYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79
>BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 34.3 bits (75), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 7 TGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 120
TG KGY F EYK++ + A R+ +G I + VD
Sbjct: 93 TGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVD 130
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 34.3 bits (75), Expect = 0.40
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 22 GYGFCEYKDQETALSAMRNLNG-YEIGGRSLRVDNACTEKSR 144
GY F +Y DQ A+ A+ L+G E+ G+ + VD + ++K R
Sbjct: 38 GYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 34.3 bits (75), Expect = 0.40
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 22 GYGFCEYKDQETALSAMRNLNG-YEIGGRSLRVDNACTEKSR 144
GY F +Y DQ A+ A+ L+G E+ G+ + VD + ++K R
Sbjct: 39 GYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 80
>U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation
initiation factor protein.
Length = 814
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEI 96
E GK KGY F EY A+ A++N +GY++
Sbjct: 225 EDGKTKGYIFLEYASPAHAVDAVKNADGYKL 255
>U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein.
Length = 482
Score = 33.9 bits (74), Expect = 0.53
Identities = 13/39 (33%), Positives = 27/39 (69%)
Frame = +1
Query: 1 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 117
++T K +GF Y + +A +A++++NG++IG + L+V
Sbjct: 432 KQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKV 470
>U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein.
Length = 873
Score = 33.9 bits (74), Expect = 0.53
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEI 96
E GK KGY F EY A+ A++N +GY++
Sbjct: 225 EDGKTKGYIFLEYASPAHAVDAVKNADGYKL 255
>U30883-1|AAA93073.1| 344|Homo sapiens SRp55-1 protein.
Length = 344
Score = 33.9 bits (74), Expect = 0.53
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E GYGF E++D A A+ LNG E+ G + V++A
Sbjct: 30 EVDLKNGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHA 70
>U30829-1|AAA93072.1| 335|Homo sapiens SRp55-3 protein.
Length = 335
Score = 33.9 bits (74), Expect = 0.53
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E GYGF E++D A A+ LNG E+ G + V++A
Sbjct: 30 EVDLKNGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHA 70
>U30828-1|AAA93071.1| 135|Homo sapiens SRp55-2 protein.
Length = 135
Score = 33.9 bits (74), Expect = 0.53
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 4 ETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 126
E GYGF E++D A A+ LNG E+ G + V++A
Sbjct: 30 EVDLKNGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHA 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,210,992
Number of Sequences: 237096
Number of extensions: 2233078
Number of successful extensions: 14865
Number of sequences better than 10.0: 450
Number of HSP's better than 10.0 without gapping: 13925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14846
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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