Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0892
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    28   0.053
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   2.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 0.053
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 123 GFPQRLMLPLGTIGGLEMQMYVIVS 197
           G+PQ ++LP GT  G    ++V++S
Sbjct: 580 GWPQHMLLPKGTEAGYPCHLFVMIS 604


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +2

Query: 215 ALAHIGHDHDEGPCACRWSSCISTMPLGYPFDRPIDMAS 331
           AL H+  D   G       S  +T P GYP D P  M S
Sbjct: 73  ALPHLSGDMTHGASI----SPQNTPPAGYPMDVPHGMGS 107


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +2

Query: 215 ALAHIGHDHDEGPCACRWSSCISTMPLGYPFDRPIDMAS 331
           AL H+  D   G       S  +T P GYP D P  M S
Sbjct: 73  ALPHLSGDMTHGASI----SPQNTPPAGYPMDVPHGMGS 107


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 267 QRQAHGPSSWSCPMWARAYRCGPA 196
           QR+  G ++  CP    A R GPA
Sbjct: 282 QRRYTGRATCDCPNCQEAERLGPA 305



 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +2

Query: 191 RVAGPHRYALAHIGHDHDEGPCACRWSSC 277
           +V G   +  AH+     E P  C W  C
Sbjct: 324 KVYGKTSHLKAHLRWHTGERPFVCNWLFC 352


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 245 HHGHVQCGQEHTGADRRHD 189
           HH +   G  HTG    HD
Sbjct: 43  HHFNSPAGNAHTGPTGTHD 61


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 14  RIYPRVPFDSSCNG 55
           R+YP VPF S  +G
Sbjct: 357 RLYPSVPFISRVSG 370


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 355  ELHVVSEEARHVNRSVKWISERHGGDT*APATSTRSFIM 239
            +L  + E  R +NR ++ + +    D  +PA S  +  M
Sbjct: 1101 QLRKIQESLRDLNRKIESLEKMQYPDLRSPAVSNVTTFM 1139


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -3

Query: 355  ELHVVSEEARHVNRSVKWISERHGGDT*APATSTRSFIM 239
            +L  + E  R +NR ++ + +    D  +PA S  +  M
Sbjct: 1101 QLRKIQESLRDLNRKIESLEKMQYPDLRSPAVSNVTTFM 1139


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 14  RIYPRVPFDSSCNG 55
           R+YP VPF S  +G
Sbjct: 357 RLYPSVPFISRVSG 370


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 76  EMARQWSRTGGASLATDSLRDL 141
           E+A+ W +T    L T+ ++DL
Sbjct: 19  EVAQVWEQTLQKGLDTEEIKDL 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,424
Number of Sequences: 336
Number of extensions: 3063
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)