Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0890
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro...    33   0.96 
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro...    33   0.96 
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd...    33   0.96 
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd...    33   0.96 
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd...    33   0.96 
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd...    33   0.96 
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd...    33   0.96 

>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
           dehydrogenase protein.
          Length = 1025

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = -3

Query: 254 CLRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCG 75
           C  +ALR GA  V   +R+   N+    +E++ A+EE   F   + P  + + + G +  
Sbjct: 347 CATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKV-IVKGGRIVA 405

Query: 74  IRFLRTRLGE 45
           ++F+RT   E
Sbjct: 406 MQFVRTEQDE 415


>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
           dehydrogenase protein.
          Length = 1025

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = -3

Query: 254 CLRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCG 75
           C  +ALR GA  V   +R+   N+    +E++ A+EE   F   + P  + + + G +  
Sbjct: 347 CATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKV-IVKGGRIVA 405

Query: 74  IRFLRTRLGE 45
           ++F+RT   E
Sbjct: 406 MQFVRTEQDE 415


>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
           dehydrogenase protein.
          Length = 1025

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = -3

Query: 254 CLRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCG 75
           C  +ALR GA  V   +R+   N+    +E++ A+EE   F   + P  + + + G +  
Sbjct: 347 CATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKV-IVKGGRIVA 405

Query: 74  IRFLRTRLGE 45
           ++F+RT   E
Sbjct: 406 MQFVRTEQDE 415


>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
           dehydrogenase protein.
          Length = 1025

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = -3

Query: 254 CLRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCG 75
           C  +ALR GA  V   +R+   N+    +E++ A+EE   F   + P  + + + G +  
Sbjct: 347 CATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKV-IVKGGRIVA 405

Query: 74  IRFLRTRLGE 45
           ++F+RT   E
Sbjct: 406 MQFVRTEQDE 415


>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
           dehydrogenase protein.
          Length = 1025

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = -3

Query: 254 CLRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCG 75
           C  +ALR GA  V   +R+   N+    +E++ A+EE   F   + P  + + + G +  
Sbjct: 347 CATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKV-IVKGGRIVA 405

Query: 74  IRFLRTRLGE 45
           ++F+RT   E
Sbjct: 406 MQFVRTEQDE 415


>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
           dehydrogenase protein.
          Length = 1025

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = -3

Query: 254 CLRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCG 75
           C  +ALR GA  V   +R+   N+    +E++ A+EE   F   + P  + + + G +  
Sbjct: 347 CATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKV-IVKGGRIVA 405

Query: 74  IRFLRTRLGE 45
           ++F+RT   E
Sbjct: 406 MQFVRTEQDE 415


>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
           dehydrogenase protein.
          Length = 1025

 Score = 33.1 bits (72), Expect = 0.96
 Identities = 20/70 (28%), Positives = 36/70 (51%)
 Frame = -3

Query: 254 CLRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCG 75
           C  +ALR GA  V   +R+   N+    +E++ A+EE   F   + P  + + + G +  
Sbjct: 347 CATSALRCGARRVFIVFRKGFVNIRAVPEEMELAKEEKCEFLPFLSPRKV-IVKGGRIVA 405

Query: 74  IRFLRTRLGE 45
           ++F+RT   E
Sbjct: 406 MQFVRTEQDE 415


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,807,969
Number of Sequences: 237096
Number of extensions: 2584459
Number of successful extensions: 9891
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9888
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)