Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0890
(691 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.3
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 6.3
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 8.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 8.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.4
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 8.4
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 12 LSIPPTPLGIRLSKTRAQETNPADVTLFIQLKRHR 116
L+ PPTPL I + +R E + D T + R R
Sbjct: 1394 LTSPPTPLSISRAGSR-DEDSTRDSTKLDRSSRER 1427
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 636 QFQKSGGLLNLSAIPF 589
++ +SGGL+N+ P+
Sbjct: 204 KYHRSGGLMNVERFPY 219
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 94 VYYGNFPPRPIMVRPWVPMRGQ 115
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 94 VYYGNFPPRPIMVRPWVPMRGQ 115
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 94 VYYGNFPPRPIMVRPWVPMRGQ 115
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 94 VYYGNFPPRPIMVRPWVPMRGQ 115
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 94 VYYGNFPPRPIMVRPWVPMRGQ 115
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 94 VYYGNFPPRPIMVRPWVPMRGQ 115
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 94 VYYGNFPPRPIMVRPWVPMRGQ 115
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 343 VYYGNFPPRPIMVRPWVPMRGQ 364
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 343 VYYGNFPPRPIMVRPWVPMRGQ 364
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 343 VYYGNFPPRPIMVRPWVPMRGQ 364
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 343 VYYGNFPPRPIMVRPWVPMRGQ 364
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 343 VYYGNFPPRPIMVRPWVPMRGQ 364
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 343 VYYGNFPPRPIMVRPWVPMRGQ 364
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 342 VYYGNFPPRPIMVRPWVPMRGQ 363
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 327 VYYGNFPPRPIMVRPWVPMRGQ 348
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 92 VHSAQAPPAGR*IRSWPPLRGR 157
V+ PP +R W P+RG+
Sbjct: 343 VYYGNFPPRPIMVRPWVPMRGQ 364
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 8.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 568 PCWHAV 551
PCWHAV
Sbjct: 1465 PCWHAV 1470
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 357 LAMRNGSAS*TPGASSLGKPAF 422
L ++NG PG + +G+P++
Sbjct: 204 LGVQNGYGRHLPGHAQMGRPSY 225
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,257
Number of Sequences: 438
Number of extensions: 4694
Number of successful extensions: 29
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -