Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0887
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   4.0  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   5.2  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   9.1  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 490  KCKQFREG*DKLVSYHTKFICL*AVGML*SIFTQKIYSVI 371
            K K  R+   K +SYH + I +   G   S+F   +YS I
Sbjct: 1205 KEKMLRKRPGKCISYHPEEIEIKQCGTATSLFHASLYSTI 1244


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 419 CLQTNELCMV*NEFILSFSKLFA 487
           C++T+ L +V N+ +L F  LFA
Sbjct: 457 CIETHSLGLVYNQTLLWFGVLFA 479


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 634 IIM*YYVKFIRKPYLKDLSMAV 569
           I+  YY +  +KPY++++ +A+
Sbjct: 318 ILTSYYPELTKKPYIQEVYLAI 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,714
Number of Sequences: 2352
Number of extensions: 12611
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)