Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0886
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.3  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 321 PKCNTLLADKSNPTSLNYCSLQISLI 244
           P  + LL+DK+ P + N C+  + +I
Sbjct: 215 PIIHNLLSDKNPPNTENNCAQPVVVI 240


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 416 NSVSTKTTLIMYKQPSQIIPRALVIFN 336
           N   T+T L  ++ P   IP    IFN
Sbjct: 369 NPTKTRTNLPTHRHPQDEIPYCGKIFN 395


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 404 WKRCYHIVLRR 436
           WK+C++I L+R
Sbjct: 174 WKKCFNIRLKR 184


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 493 ARMLLKKRYKLLPQCRQSLWS 555
           A ++LK R+K +    ++LW+
Sbjct: 193 ANVILKTRFKTINNILENLWA 213



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 411 AVITSFCEELYKNKCR 458
           A+I S   +LYKNK R
Sbjct: 484 ALINSILRKLYKNKYR 499


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 445 LYNSSQNDVITAFPLRPRLSCISSPLK*FHALSLFLT 335
           +++   NDVI       R++ +  P   F+A+   LT
Sbjct: 130 VFSRFSNDVIATAAFGIRVNSVQEPNNEFYAMGRSLT 166


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 376 CLYMISVVLVETLLSHRFAKNC 441
           CL+ I++ + +  L++ F K C
Sbjct: 34  CLFPITINIRKNGLNYNFTKKC 55


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 102 RCTSTRSKELSCLAT*AMGYQNIWALR 182
           R T    KELS L   ++G+   W ++
Sbjct: 348 RLTQFLDKELSYLILFSIGFNCFWVMK 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,762
Number of Sequences: 336
Number of extensions: 3922
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)