Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0886
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10413-1|AAA86285.1| 379|Homo sapiens farnesyl-protein transfer... 109 1e-23
L00634-1|AAA35853.1| 379|Homo sapiens farnesyl-protein transfer... 109 1e-23
BT009854-1|AAP88856.1| 379|Homo sapiens farnesyltransferase, CA... 109 1e-23
BC084566-1|AAH84566.1| 379|Homo sapiens farnesyltransferase, CA... 109 1e-23
BC037295-1|AAH37295.1| 214|Homo sapiens FNTA protein protein. 109 1e-23
BC017029-1|AAH17029.2| 376|Homo sapiens FNTA protein protein. 109 1e-23
Y08200-1|CAA69382.1| 567|Homo sapiens rab geranylgeranyl transf... 43 9e-04
CR541797-1|CAG46596.1| 567|Homo sapiens RABGGTA protein. 43 9e-04
BC003093-1|AAH03093.1| 567|Homo sapiens Rab geranylgeranyltrans... 43 9e-04
BC053622-1|AAH53622.1| 403|Homo sapiens PTAR1 protein protein. 35 0.23
AL162412-2|CAI10945.2| 312|Homo sapiens protein prenyltransfera... 35 0.23
AL162412-1|CAI10944.1| 350|Homo sapiens protein prenyltransfera... 35 0.23
AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens ... 30 8.8
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein. 30 8.8
>L10413-1|AAA86285.1| 379|Homo sapiens farnesyl-protein transferase
alpha-subunit protein.
Length = 379
Score = 109 bits (261), Expect = 1e-23
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +1
Query: 52 VLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRN 231
VLVEWL+DP+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRN
Sbjct: 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233
Query: 232 NSAWNQRY 255
NS WNQRY
Sbjct: 234 NSVWNQRY 241
Score = 82.2 bits (194), Expect = 2e-15
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +3
Query: 255 FVVNNNLGWSD-LICQQEVCYTLEKINFVKNNESAWNYLRGLLIHDKRGLSGNAVITSFC 431
FV++N G++D + ++EV YTLE I V +NESAWNYL+G+L RGLS + +
Sbjct: 242 FVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGIL--QDRGLSKYPNLLNQL 299
Query: 432 EELYKNKCRSPFLLAFIIDVCEDAIKKKIQTASTMQTEPVELCQALATRYDT 587
+L + SP+L+AF++D+ ED ++ + + + +ELC+ LA DT
Sbjct: 300 LDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDT 350
Score = 44.0 bits (99), Expect = 5e-04
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 VLVEWLQ-DPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVR 228
VL++ LQ D E+ + + PKNY W HR+ ++ +EL+F+ +++ D +
Sbjct: 139 VLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK 198
Query: 229 NNSAWNQR 252
N AW R
Sbjct: 199 NYHAWQHR 206
Score = 33.1 bits (72), Expect = 0.94
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 11 KNSPKNYQVWHHRR 52
+ PKNYQVWHHRR
Sbjct: 160 EEQPKNYQVWHHRR 173
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 ELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
+LT DA+ + NY W R+ +K+ L+E E++++ +I + +N W+ R
Sbjct: 118 KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHE-EMNYITAIIEEQPKNYQVWHHR 172
>L00634-1|AAA35853.1| 379|Homo sapiens farnesyl-protein transferase
alpha-subunit protein.
Length = 379
Score = 109 bits (261), Expect = 1e-23
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +1
Query: 52 VLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRN 231
VLVEWL+DP+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRN
Sbjct: 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233
Query: 232 NSAWNQRY 255
NS WNQRY
Sbjct: 234 NSVWNQRY 241
Score = 82.2 bits (194), Expect = 2e-15
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +3
Query: 255 FVVNNNLGWSD-LICQQEVCYTLEKINFVKNNESAWNYLRGLLIHDKRGLSGNAVITSFC 431
FV++N G++D + ++EV YTLE I V +NESAWNYL+G+L RGLS + +
Sbjct: 242 FVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGIL--QDRGLSKYPNLLNQL 299
Query: 432 EELYKNKCRSPFLLAFIIDVCEDAIKKKIQTASTMQTEPVELCQALATRYDT 587
+L + SP+L+AF++D+ ED ++ + + + +ELC+ LA DT
Sbjct: 300 LDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDT 350
Score = 44.0 bits (99), Expect = 5e-04
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 VLVEWLQ-DPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVR 228
VL++ LQ D E+ + + PKNY W HR+ ++ +EL+F+ +++ D +
Sbjct: 139 VLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK 198
Query: 229 NNSAWNQR 252
N AW R
Sbjct: 199 NYHAWQHR 206
Score = 33.1 bits (72), Expect = 0.94
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 11 KNSPKNYQVWHHRR 52
+ PKNYQVWHHRR
Sbjct: 160 EEQPKNYQVWHHRR 173
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 ELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
+LT DA+ + NY W R+ +K+ L+E E++++ +I + +N W+ R
Sbjct: 118 KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHE-EMNYITAIIEEQPKNYQVWHHR 172
>BT009854-1|AAP88856.1| 379|Homo sapiens farnesyltransferase, CAAX
box, alpha protein.
Length = 379
Score = 109 bits (261), Expect = 1e-23
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +1
Query: 52 VLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRN 231
VLVEWL+DP+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRN
Sbjct: 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233
Query: 232 NSAWNQRY 255
NS WNQRY
Sbjct: 234 NSVWNQRY 241
Score = 82.2 bits (194), Expect = 2e-15
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +3
Query: 255 FVVNNNLGWSD-LICQQEVCYTLEKINFVKNNESAWNYLRGLLIHDKRGLSGNAVITSFC 431
FV++N G++D + ++EV YTLE I V +NESAWNYL+G+L RGLS + +
Sbjct: 242 FVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGIL--QDRGLSKYPNLLNQL 299
Query: 432 EELYKNKCRSPFLLAFIIDVCEDAIKKKIQTASTMQTEPVELCQALATRYDT 587
+L + SP+L+AF++D+ ED ++ + + + +ELC+ LA DT
Sbjct: 300 LDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDT 350
Score = 44.0 bits (99), Expect = 5e-04
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 VLVEWLQ-DPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVR 228
VL++ LQ D E+ + + PKNY W HR+ ++ +EL+F+ +++ D +
Sbjct: 139 VLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK 198
Query: 229 NNSAWNQR 252
N AW R
Sbjct: 199 NYHAWQHR 206
Score = 33.1 bits (72), Expect = 0.94
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 11 KNSPKNYQVWHHRR 52
+ PKNYQVWHHRR
Sbjct: 160 EEQPKNYQVWHHRR 173
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 ELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
+LT DA+ + NY W R+ +K+ L+E E++++ +I + +N W+ R
Sbjct: 118 KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHE-EMNYITAIIEEQPKNYQVWHHR 172
>BC084566-1|AAH84566.1| 379|Homo sapiens farnesyltransferase, CAAX
box, alpha protein.
Length = 379
Score = 109 bits (261), Expect = 1e-23
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +1
Query: 52 VLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRN 231
VLVEWL+DP+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRN
Sbjct: 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233
Query: 232 NSAWNQRY 255
NS WNQRY
Sbjct: 234 NSVWNQRY 241
Score = 82.2 bits (194), Expect = 2e-15
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +3
Query: 255 FVVNNNLGWSD-LICQQEVCYTLEKINFVKNNESAWNYLRGLLIHDKRGLSGNAVITSFC 431
FV++N G++D + ++EV YTLE I V +NESAWNYL+G+L RGLS + +
Sbjct: 242 FVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGIL--QDRGLSKYPNLLNQL 299
Query: 432 EELYKNKCRSPFLLAFIIDVCEDAIKKKIQTASTMQTEPVELCQALATRYDT 587
+L + SP+L+AF++D+ ED ++ + + + +ELC+ LA DT
Sbjct: 300 LDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDT 350
Score = 44.0 bits (99), Expect = 5e-04
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 VLVEWLQ-DPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVR 228
VL++ LQ D E+ + + PKNY W HR+ ++ +EL+F+ +++ D +
Sbjct: 139 VLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK 198
Query: 229 NNSAWNQR 252
N AW R
Sbjct: 199 NYHAWQHR 206
Score = 33.1 bits (72), Expect = 0.94
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 11 KNSPKNYQVWHHRR 52
+ PKNYQVWHHRR
Sbjct: 160 EEQPKNYQVWHHRR 173
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 ELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
+LT DA+ + NY W R+ +K+ L+E E++++ +I + +N W+ R
Sbjct: 118 KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHE-EMNYITAIIEEQPKNYQVWHHR 172
>BC037295-1|AAH37295.1| 214|Homo sapiens FNTA protein protein.
Length = 214
Score = 109 bits (261), Expect = 1e-23
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +1
Query: 52 VLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRN 231
VLVEWL+DP+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRN
Sbjct: 83 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 142
Query: 232 NSAWNQRY 255
NS WNQRY
Sbjct: 143 NSVWNQRY 150
Score = 44.0 bits (99), Expect = 5e-04
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 VLVEWLQ-DPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVR 228
VL++ LQ D E+ + + PKNY W HR+ ++ +EL+F+ +++ D +
Sbjct: 48 VLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK 107
Query: 229 NNSAWNQR 252
N AW R
Sbjct: 108 NYHAWQHR 115
Score = 33.1 bits (72), Expect = 0.94
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 11 KNSPKNYQVWHHRR 52
+ PKNYQVWHHRR
Sbjct: 69 EEQPKNYQVWHHRR 82
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 ELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
+LT DA+ + NY W R+ +K+ L+E E++++ +I + +N W+ R
Sbjct: 27 KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHE-EMNYITAIIEEQPKNYQVWHHR 81
>BC017029-1|AAH17029.2| 376|Homo sapiens FNTA protein protein.
Length = 376
Score = 109 bits (261), Expect = 1e-23
Identities = 45/68 (66%), Positives = 53/68 (77%)
Frame = +1
Query: 52 VLVEWLQDPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVRN 231
VLVEWL+DP+ ELE D L QD KNYHAWQHRQW I+ F L++ EL +VD L+ +DVRN
Sbjct: 171 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 230
Query: 232 NSAWNQRY 255
NS WNQRY
Sbjct: 231 NSVWNQRY 238
Score = 82.2 bits (194), Expect = 2e-15
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +3
Query: 255 FVVNNNLGWSD-LICQQEVCYTLEKINFVKNNESAWNYLRGLLIHDKRGLSGNAVITSFC 431
FV++N G++D + ++EV YTLE I V +NESAWNYL+G+L RGLS + +
Sbjct: 239 FVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGIL--QDRGLSKYPNLLNQL 296
Query: 432 EELYKNKCRSPFLLAFIIDVCEDAIKKKIQTASTMQTEPVELCQALATRYDT 587
+L + SP+L+AF++D+ ED ++ + + + +ELC+ LA DT
Sbjct: 297 LDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDT 347
Score = 44.0 bits (99), Expect = 5e-04
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 VLVEWLQ-DPTMELELTGDALLQDPKNYHAWQHRQWAIKTFGLYEKELDFVDNLITDDVR 228
VL++ LQ D E+ + + PKNY W HR+ ++ +EL+F+ +++ D +
Sbjct: 136 VLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK 195
Query: 229 NNSAWNQR 252
N AW R
Sbjct: 196 NYHAWQHR 203
Score = 33.1 bits (72), Expect = 0.94
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 11 KNSPKNYQVWHHRR 52
+ PKNYQVWHHRR
Sbjct: 157 EEQPKNYQVWHHRR 170
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 ELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
+LT DA+ + NY W R+ +K+ L+E E++++ +I + +N W+ R
Sbjct: 115 KLTRDAIELNAANYTVWHFRRVLLKSLQKDLHE-EMNYITAIIEEQPKNYQVWHHR 169
>Y08200-1|CAA69382.1| 567|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 567
Score = 43.2 bits (97), Expect = 9e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 TMELELTGDALLQDPKNYHAWQHRQW-AIKTFGLYEKELDFVDNLITDDVRNNSAWNQR 252
T ELEL L D +N+H W +R++ A + +EL F D+LIT + N S+W+ R
Sbjct: 126 TRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWHYR 184
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ELELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
EL L +PK+Y W HR W + + +EL+ + D RN W+ R
Sbjct: 92 ELGFLESCLRVNPKSYGTWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYR 149
>CR541797-1|CAG46596.1| 567|Homo sapiens RABGGTA protein.
Length = 567
Score = 43.2 bits (97), Expect = 9e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 TMELELTGDALLQDPKNYHAWQHRQW-AIKTFGLYEKELDFVDNLITDDVRNNSAWNQR 252
T ELEL L D +N+H W +R++ A + +EL F D+LIT + N S+W+ R
Sbjct: 126 TRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWHYR 184
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ELELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
EL L +PK+Y W HR W + + +EL+ + D RN W+ R
Sbjct: 92 ELGFLESCLRVNPKSYGTWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYR 149
>BC003093-1|AAH03093.1| 567|Homo sapiens Rab
geranylgeranyltransferase, alpha subunit protein.
Length = 567
Score = 43.2 bits (97), Expect = 9e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 TMELELTGDALLQDPKNYHAWQHRQW-AIKTFGLYEKELDFVDNLITDDVRNNSAWNQR 252
T ELEL L D +N+H W +R++ A + +EL F D+LIT + N S+W+ R
Sbjct: 126 TRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYSSWHYR 184
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 ELELTGDALLQDPKNYHAWQHRQWAIKTF--GLYEKELDFVDNLITDDVRNNSAWNQR 252
EL L +PK+Y W HR W + + +EL+ + D RN W+ R
Sbjct: 92 ELGFLESCLRVNPKSYGTWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYR 149
>BC053622-1|AAH53622.1| 403|Homo sapiens PTAR1 protein protein.
Length = 403
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 85 ELELTGDALLQDPKNYHAWQHRQWAIK 165
E+E+ G+A + P NY+AW HR W ++
Sbjct: 181 EMEVCGEAAGRYPSNYNAWSHRIWVLQ 207
>AL162412-2|CAI10945.2| 312|Homo sapiens protein prenyltransferase
alpha subunit repeat containing 1 protein.
Length = 312
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 85 ELELTGDALLQDPKNYHAWQHRQWAIK 165
E+E+ G+A + P NY+AW HR W ++
Sbjct: 180 EMEVCGEAAGRYPSNYNAWSHRIWVLQ 206
>AL162412-1|CAI10944.1| 350|Homo sapiens protein prenyltransferase
alpha subunit repeat containing 1 protein.
Length = 350
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 85 ELELTGDALLQDPKNYHAWQHRQWAIK 165
E+E+ G+A + P NY+AW HR W ++
Sbjct: 101 EMEVCGEAAGRYPSNYNAWSHRIWVLQ 127
>AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20361 fis, clone HEP16789. ).
Length = 251
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 312 YTLEKINFVKNNESAWNYLRGLLIHDKRGLSGNAVITSFCEELYKNKCRSPFLL 473
Y LE +N++ N W +R ++ D+ GL +F E+Y PFL+
Sbjct: 84 YQLEGVNWLLFN---WYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV 134
>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
Length = 1967
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 312 YTLEKINFVKNNESAWNYLRGLLIHDKRGLSGNAVITSFCEELYKNKCRSPFLL 473
Y LE +N++ N W +R ++ D+ GL +F E+Y PFL+
Sbjct: 209 YQLEGVNWLLFN---WYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV 259
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,221,065
Number of Sequences: 237096
Number of extensions: 2211648
Number of successful extensions: 4127
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4119
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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