Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0885
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q95US6 Cluster: Transposase; n=1; Ceratitis rosa|Rep: T...    46   8e-04
UniRef50_Q7PWX4 Cluster: ENSANGP00000020495; n=1; Anopheles gamb...    33   6.3  

>UniRef50_Q95US6 Cluster: Transposase; n=1; Ceratitis rosa|Rep:
           Transposase - Ceratitis rosa (Natal fruit fly)
          Length = 361

 Score = 46.0 bits (104), Expect = 8e-04
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +3

Query: 282 TKLIWPRIDGMDFTSMWFQHDRATCHTKRE 371
           T  +WP+++ MD   MWFQ D ATCHT  E
Sbjct: 232 TNFLWPQLEDMDVDDMWFQQDGATCHTANE 261



 Score = 35.5 bits (78), Expect = 1.2
 Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
 Frame = +2

Query: 452 RSCDLTPL-YFLWGYVKSLV 508
           RSCDLTPL +FLWGY+K  V
Sbjct: 286 RSCDLTPLDFFLWGYLKEKV 305


>UniRef50_Q7PWX4 Cluster: ENSANGP00000020495; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000020495 - Anopheles gambiae
           str. PEST
          Length = 345

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
 Frame = +2

Query: 131 LSC--QISHE------HILSRDISP*NARRLSAGIIGPYFFEDTQEAALISMATDIGRHK 286
           LSC  ++SHE      HI+S   SP     ++AG+ GPY  E T E    S A +   + 
Sbjct: 13  LSCAVRLSHEYPRSTVHIISEHFSPNTTSDVAAGLWGPYCLEGTSEYECRSWAQETHNYF 72

Query: 287 VNLASD 304
           + L  D
Sbjct: 73  LQLWQD 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,719,221
Number of Sequences: 1657284
Number of extensions: 11702282
Number of successful extensions: 22019
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22015
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)