Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0885
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.3  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.2  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 274 DIGRH*YERGFLRIFEEVRADDSGG 200
           D GR+  ERG +   E V A ++GG
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGG 314


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 329 HACEIHTIYPRPN*LCVARYR 267
           H CE+HTI+   N L V + R
Sbjct: 115 HICELHTIFLVCNVLTVFKIR 135


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 22  IATILKSIKCQKCQSEPIGFFNR 90
           +  ++  +   KCQ+ PIG   R
Sbjct: 194 VEEVISDLALSKCQNTPIGILGR 216


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 22  IATILKSIKCQKCQSEPIGFFNR 90
           +  ++  +   KCQ+ PIG   R
Sbjct: 194 VEEVISDLALSKCQNTPIGILGR 216


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 113 SCQSSLASLLKNPIGSD 63
           +C+S+LA LL   +G D
Sbjct: 98  TCRSALALLLSPEVGKD 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,383
Number of Sequences: 336
Number of extensions: 3097
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)