Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0885
(673 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.6
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 23 2.6
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 4.6
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 4.6
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.6
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.1
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 156 TYLVVIFHHETLD 194
T LV+IFHH T D
Sbjct: 275 TVLVLIFHHRTPD 287
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 156 TYLVVIFHHETLD 194
T LV+IFHH T D
Sbjct: 275 TVLVLIFHHRTPD 287
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 156 TYLVVIFHHETLD 194
T LV+IFHH T D
Sbjct: 275 TVLVLIFHHRTPD 287
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 156 TYLVVIFHHETLD 194
T LV+IFHH T D
Sbjct: 275 TVLVLIFHHRTPD 287
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 156 TYLVVIFHHETLD 194
T LV+IFHH T D
Sbjct: 275 TVLVLIFHHRTPD 287
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 156 TYLVVIFHHETLD 194
T LV+IFHH T D
Sbjct: 275 TVLVLIFHHRTPD 287
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 371 FPFCVASGAVMLEPHACEIHT 309
F FCV GA+ +E +HT
Sbjct: 8 FGFCVCVGALTIEELKTRLHT 28
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/43 (25%), Positives = 17/43 (39%)
Frame = +3
Query: 243 KPRSYQWRPISGDTKLIWPRIDGMDFTSMWFQHDRATCHTKRE 371
KPR WR T + R++G+ D T T+ +
Sbjct: 396 KPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQ 438
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/43 (25%), Positives = 17/43 (39%)
Frame = +3
Query: 243 KPRSYQWRPISGDTKLIWPRIDGMDFTSMWFQHDRATCHTKRE 371
KPR WR T + R++G+ D T T+ +
Sbjct: 311 KPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQ 353
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/43 (25%), Positives = 17/43 (39%)
Frame = +3
Query: 243 KPRSYQWRPISGDTKLIWPRIDGMDFTSMWFQHDRATCHTKRE 371
KPR WR T + R++G+ D T T+ +
Sbjct: 630 KPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTRTREQ 672
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 375 MLPVLCGKW 349
MLP CGKW
Sbjct: 362 MLPNCCGKW 370
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,162
Number of Sequences: 438
Number of extensions: 3901
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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