Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0882
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione S-tran...    24   4.0  
AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione S-tran...    24   4.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   5.3  

>AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione
           S-transferase 3-8 protein.
          Length = 225

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 486 VKRDRIHFR*FLKSAGYKSLIMFIFANIPHSNKYFLH 596
           V+R R+H    L++    S + F+F  + +S K + H
Sbjct: 93  VRRARVHTALHLEAGVIFSRLSFLFEPVIYSGKSYFH 129


>AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione
           S-transferase E7 protein.
          Length = 225

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 486 VKRDRIHFR*FLKSAGYKSLIMFIFANIPHSNKYFLH 596
           V+R R+H    L++    S + F+F  + +S K + H
Sbjct: 93  VRRARVHTALHLEAGVIFSRLSFLFEPVIYSGKSYFH 129


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 232  FHVPDIYNSPTCFRDSFCHQG 294
            FH+  + +    FRD  CH G
Sbjct: 977  FHLAQVLSGHGFFRDYLCHNG 997


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,102
Number of Sequences: 2352
Number of extensions: 12749
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)