Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0879
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.1  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 546 YLNCGVFFVMLVWYFVEVNW 605
           ++ C +FFV+L+W    +N+
Sbjct: 133 FITCELFFVILLWISFFLNF 152


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 238 DEI*LYSEVMVPTTTNSNPCLLRPT 312
           D I LY E+      N N C +R T
Sbjct: 198 DNIDLYEEIFNGNRANPNGCQIRGT 222


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +1

Query: 238 DEI*LYSEVMVPTTTNSNPCLLRPT 312
           D I LY E+      N N C +R T
Sbjct: 205 DNIDLYEEIFNGNRANPNGCQIRGT 229


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +2

Query: 224 LILCVMKFDFIQRLWCQQPPTPTPVCFVQHTTIQIYLVVSWSL*YNI 364
           +IL ++   F+  +W  +    T   +  H    +Y+V+   L YN+
Sbjct: 143 VILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFLTYNL 189


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = +2

Query: 224 LILCVMKFDFIQRLWCQQPPTPTPVCFVQHTTIQIYLVVSWSL*YNI 364
           +IL ++   F+  +W  +    T   +  H    +Y+V+   L YN+
Sbjct: 143 VILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLHFLTYNL 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,183
Number of Sequences: 336
Number of extensions: 3858
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)