Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0877
         (723 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    51   3e-05
UniRef50_Q21KR0 Cluster: Potassium efflux system protein; n=1; S...    33   7.1  
UniRef50_Q4X351 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -1

Query: 141 FLLLRWVDELTAHLTLSGYWSP 76
           FLLLRWVDELTAHL LSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q21KR0 Cluster: Potassium efflux system protein; n=1;
           Saccharophagus degradans 2-40|Rep: Potassium efflux
           system protein - Saccharophagus degradans (strain 2-40 /
           ATCC 43961 / DSM 17024)
          Length = 583

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 594 VPYRYQNVDFLKLYLIVLPLFKRI 665
           +PY Y+ + FL   +IV+PLFKRI
Sbjct: 11  IPYLYETIAFLLTVVIVVPLFKRI 34


>UniRef50_Q4X351 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 95

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 424 NISRFCKS*NKMSFLVCCFNNNYYGIIMFNIY 519
           NI  + K  N++ +L+  F+ NYY  I+ NIY
Sbjct: 24  NILEYIKLLNELKYLIILFSLNYYNFIVLNIY 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,086,646
Number of Sequences: 1657284
Number of extensions: 12310845
Number of successful extensions: 21837
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21836
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)