Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0877
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 14  YTEILELISQGRWRI 58
           Y EI+EL  +G W++
Sbjct: 299 YNEIVELQKEGGWKV 313


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 658 LNRGSTIKYNFKKSTF 611
           LNR S +KY F+++ F
Sbjct: 366 LNRKSDVKYTFEETGF 381


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
 Frame = +1

Query: 304 WSDVVMTTS-----TRLNRSKKVVLITIYCLYFFTRISNCYWVFC 423
           W + V  TS       L +SKK      Y +Y F     C   FC
Sbjct: 25  WENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFC 69


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
 Frame = +1

Query: 304 WSDVVMTTS-----TRLNRSKKVVLITIYCLYFFTRISNCYWVFC 423
           W + V  TS       L +SKK      Y +Y F     C   FC
Sbjct: 258 WENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFC 302


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
 Frame = +1

Query: 304 WSDVVMTTS-----TRLNRSKKVVLITIYCLYFFTRISNCYWVFC 423
           W + V  TS       L +SKK      Y +Y F     C   FC
Sbjct: 258 WENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFC 302


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 337 LNRSKKVVLITIYCLYFFTRISNCYWVF 420
           LNR  +V ++TI+ + F+  IS  ++ F
Sbjct: 223 LNRYFEVQVLTIFGVSFYFFISTFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 337 LNRSKKVVLITIYCLYFFTRISNCYWVF 420
           LNR  +V ++TI+ + F+  IS  ++ F
Sbjct: 219 LNRYFEVQVLTIFGVSFYFFISTFFYFF 246


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 233 LKLLLRFIS*KVSCDLHFSWLRTTGQ 310
           L   L FI+  ++ DLH SW   TGQ
Sbjct: 199 LSKYLDFIN-VMAYDLHGSWESVTGQ 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,684
Number of Sequences: 336
Number of extensions: 3641
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)