Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0876
(726 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 0.62
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 23 2.5
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 4.4
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 4.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 4.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 4.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 22 4.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.4
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 5.8
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 7.7
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 7.7
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 25.0 bits (52), Expect = 0.62
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = +2
Query: 563 VHIEMFSRRGFA---HPPSGRPYFCH 631
+ + M S+ G A HP + P+FCH
Sbjct: 104 IPVSMASKMGLAPTGHPGAALPFFCH 129
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 23.0 bits (47), Expect = 2.5
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 240 SIPCI-NTEWPASWVTFPSLSSPVISISTW*PGSLLLV*FETKTPSPRPNSTF 395
S+P + + +WP +W + SSP S T P ++ P+ +P + F
Sbjct: 72 SVPRLGHPQWPFAWGSLXRSSSPQTSAPTGPP--IVRCALRKHKPNRKPRTPF 122
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 22.2 bits (45), Expect = 4.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 599 HPPSGRPYFCH 631
HP + P+FCH
Sbjct: 11 HPGAALPFFCH 21
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 130 STPSNSNATKSSGLTSP 146
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 130 STPSNSNATKSSGLTSP 146
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 130 STPSNSNATKSSGLTSP 146
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 130 STPSNSNATKSSGLTSP 146
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 130 STPSNSNATKSSGLTSP 146
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 86 STPSNSNATKSSGLTSP 102
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 130 STPSNSNATKSSGLTSP 146
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 130 STPSNSNATKSSGLTSP 146
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 496 SPPSNSAYRYSSGLTYP 546
S PSNS SSGLT P
Sbjct: 130 STPSNSNATKSSGLTSP 146
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 192 SYGRWGNGHGVE*SNHCKPRYARHSRINEQCR 97
S RW N +G +NH + +R N R
Sbjct: 372 SNNRWHNNNGNNSNNHWRKNNPNDNRNNTSSR 403
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.4 bits (43), Expect = 7.7
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 596 AHPPSGRPYFCHLAAIC 646
A PP PY +AA C
Sbjct: 60 ARPPQDSPYDASVAAAC 76
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 605 PSGRPYFCHLAAICGINGALTITPV 679
P G PY H + G+ G L+ P+
Sbjct: 72 PHGPPYAPHPSLSSGLGGGLSGMPM 96
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,516
Number of Sequences: 336
Number of extensions: 3892
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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