Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0876
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93379-3|CAB07590.1|  282|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z93379-3|CAB07590.1|  282|Caenorhabditis elegans Hypothetical
           protein F21H7.4 protein.
          Length = 282

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 114 CENVERTGVCNGYFTRPHAR 173
           C NV  +GV NGYF++P A+
Sbjct: 117 CINVVHSGVTNGYFSQPQAQ 136


>Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical
           protein F22B8.7 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 578 TFQYVRRHIWY-GYVNPDE*RYAEFEGGEVYLRCF*XCCR 462
           T +Y R  I+  G    DE ++AE   G+ +L CF  C R
Sbjct: 229 TMRYFRPSIYIEGCAAWDEDKWAEIRIGDAHLECFAPCTR 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,196,836
Number of Sequences: 27780
Number of extensions: 376534
Number of successful extensions: 886
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)