Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0875
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       25   0.71 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.94 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 335 IDRNRCFQCVLKQRWSNGKIC 273
           +D+   FQC+ K+ W  G +C
Sbjct: 84  VDKINAFQCICKEGW-EGALC 103


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 206 RG*AVTYKSGLSTTRRY-KCVYKHRSFRSTISVLKRIENNDFYQCFVSSRHTL 361
           RG  V    G   TR+  KC++  +SFRS   +   ++    Y   +S    +
Sbjct: 462 RGQDVWLGKGAEQTRQILKCMWCGQSFRSLAEMTSHMQQTQHYTNIISQEQII 514


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 33  KNIFPSTIETSRMTVELFKFRIRSCNCQIIS 125
           +N+   T   S+ T  LFK   R+C+  II+
Sbjct: 195 QNVLVPTASNSKSTKVLFKDVDRNCSAYIIA 225


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 33  KNIFPSTIETSRMTVELFKFRIRSCNCQIIS 125
           +N+   T   S+ T  LFK   R+C+  II+
Sbjct: 195 QNVLVPTASNSKSTKVLFKDVDRNCSAYIIA 225


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 33  KNIFPSTIETSRMTVELFKFRIRSCNCQIIS 125
           +N+   T   S+ T  LFK   R+C+  II+
Sbjct: 195 QNVLVPTASNSKSTKVLFKDVDRNCSAYIIA 225


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 2   GTRFAYKGNKKKHLSEYNRNEP 67
           G  F  KGN K H+  +    P
Sbjct: 169 GRAFTTKGNLKTHMGVHRAKPP 190


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 287 NGKICVCKRIYSVSLCSN 234
           N  IC CK  ++ S C N
Sbjct: 43  NSYICTCKPGFTGSNCQN 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,041
Number of Sequences: 336
Number of extensions: 3417
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)