Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0873
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 33 0.14
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 33 0.14
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 31 0.96
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 31 0.96
AF548468-1|AAN40699.1| 485|Caenorhabditis elegans poly ADP-ribo... 30 1.3
AC006662-4|AAF39896.2| 485|Caenorhabditis elegans Poly(adp-ribo... 30 1.3
Z83317-4|CAL49433.1| 194|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 27 9.0
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 27 9.0
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z32679-4|CAA83591.1| 315|Caenorhabditis elegans Hypothetical pr... 27 9.0
U00047-11|AAU20827.1| 313|Caenorhabditis elegans Hypothetical p... 27 9.0
U00047-10|AAA50686.1| 471|Caenorhabditis elegans Hypothetical p... 27 9.0
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 27 9.0
AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical ... 27 9.0
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/92 (31%), Positives = 51/92 (55%)
Frame = +3
Query: 12 QVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQLCTRIQELLDDYKT 191
QV+ T+KE +A+N+SLAE+NL ++P ++ K + + + ++L + L +
Sbjct: 49 QVRSMPTDKESALAANKSLAEWNLAQKPRIDAAKTQTVDLYDQVKKLQGEVAVLKSQLDS 108
Query: 192 KSAGISPDTTHALLQTAAAESKNSQITLQETF 287
S+ S DTT +L+Q AA E+ + L F
Sbjct: 109 VSSSKSLDTTSSLMQVAAQEADDDAEALFTQF 140
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 230 SANSSSRIKEQS-DNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKNVRIVEKQHQ 406
SA+SSS I S D + + K+G+D +D + RK+ I +K+ EK+
Sbjct: 243 SASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDMDSERKRRSIMTWKSLILTTKTEKERL 302
Query: 407 NAIWYGV 427
+W G+
Sbjct: 303 GRLWNGI 309
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 230 SANSSSRIKEQS-DNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKNVRIVEKQHQ 406
SA+SSS I S D + + K+G+D +D + RK+ I +K+ EK+
Sbjct: 243 SASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDMDSERKRRSIMTWKSLILTTKTEKERL 302
Query: 407 NAIWYGV 427
+W G+
Sbjct: 303 GRLWNGI 309
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 281 DFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKNVRIVE 394
DF K+ ++K E+ EP ++IRK++AE+ ++VE
Sbjct: 238 DFTDEKV-INKLEEELEPKMSTLNIRKHQAEREEKLVE 274
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 281 DFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKNVRIVE 394
DF K+ ++K E+ EP ++IRK++AE+ ++VE
Sbjct: 235 DFTDEKV-INKLEEELEPKMSTLNIRKHQAEREEKLVE 271
>AF548468-1|AAN40699.1| 485|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme 4 protein.
Length = 485
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 311 KFLEDFEPIRKQMHIRKYKAEKNVRIVE 394
K+LE+F IR Q +K AE+NVR E
Sbjct: 8 KYLEEFRSIRFQPDFQKVDAERNVRYCE 35
>AC006662-4|AAF39896.2| 485|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 4 protein.
Length = 485
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 311 KFLEDFEPIRKQMHIRKYKAEKNVRIVE 394
K+LE+F IR Q +K AE+NVR E
Sbjct: 8 KYLEEFRSIRFQPDFQKVDAERNVRYCE 35
>Z83317-4|CAL49433.1| 194|Caenorhabditis elegans Hypothetical
protein F13G11.3 protein.
Length = 194
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 147 QLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESKNSQITLQETFYLEKWVL 308
+L TRI E+ K+++ + + TH +L + + NS LQ + ++W+L
Sbjct: 43 RLFTRIDEIPRPEKSENLALIEEVTH-VLDCSGFLNCNSSRILQSYLFNQRWIL 95
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1570 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1611
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1909 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1950
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1229 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1270
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1567 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1608
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1570 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1611
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1909 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1950
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1567 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1608
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1570 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1611
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1909 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1950
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
ZK524.2c protein.
Length = 1475
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1229 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1270
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1567 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1608
>Z32679-4|CAA83591.1| 315|Caenorhabditis elegans Hypothetical
protein C05B5.4 protein.
Length = 315
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 399 CFSTILTFFSALYFLICICLRMGSKSS--RNLSTPIFP 292
C L FF++L F+I + + + SK S RN+S + P
Sbjct: 217 CLLAALAFFASLAFIIMLSVYLKSKKSSRRNVSVNVQP 254
>U00047-11|AAU20827.1| 313|Caenorhabditis elegans Hypothetical
protein ZK418.2b protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 84 GKEPELERMKAELQEKSELGEQLCTRIQELLDDYKTKSAG 203
GK+ ++E++K E+ E L + I EL+DD+KT G
Sbjct: 271 GKKVKIEKVKKEIGESWTLIDS----ILELIDDFKTSVCG 306
>U00047-10|AAA50686.1| 471|Caenorhabditis elegans Hypothetical
protein ZK418.2a protein.
Length = 471
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 84 GKEPELERMKAELQEKSELGEQLCTRIQELLDDYKTKSAG 203
GK+ ++E++K E+ E L + I EL+DD+KT G
Sbjct: 429 GKKVKIEKVKKEIGESWTLIDS----ILELIDDFKTSVCG 464
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 27 DTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQL 152
D K+ F AS + L + K PEL+ +K L ++ EQL
Sbjct: 1569 DAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQL 1610
>AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical
protein F23F1.6 protein.
Length = 583
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 408 F*CCFSTILTFFSALYFLICICLRMGSKSSRNLST 304
F + L FF L FL+ + + MGSK S N++T
Sbjct: 159 FFALYPDFLAFF--LLFLVAVAVAMGSKFSANVNT 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,788,622
Number of Sequences: 27780
Number of extensions: 313286
Number of successful extensions: 1053
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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