Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0872
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   1.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.2  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   9.5  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 94  KVPGSHALMSDKKPTQLGKPRM 29
           +VPG+  +MS   P   G+PR+
Sbjct: 145 QVPGAPMMMSSHGPLMYGQPRV 166


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 32  SWFSKLCRFFIRHQSVRTWNLRVVSHTIA 118
           SW  KL   F+ +  VRT   ++  H  A
Sbjct: 310 SWCYKLQEQFVTNSEVRTELFKLAQHVSA 338


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 32  SWFSKLCRFFIRHQSVRTWNLRVVSHTIA 118
           SW  KL   F+ +  VRT   ++  H  A
Sbjct: 310 SWCYKLQEQFVTNSEVRTELFKLAQHVSA 338


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 441 YNV*IFARISVAGIKISGSMSNTVTHI 521
           YN   FA++ +  + +SG+     THI
Sbjct: 355 YNFNTFAKLLILVVSLSGTFGFFGTHI 381


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 502  RIRSLTFARTRKPASVGRHLQMIMQSFRCIRGFPSCVGF 618
            R +SL F    K  S+  HL  +++SF  I G P  + F
Sbjct: 1295 RKKSLDFG---KLCSLHHHLSKLIKSFNEIYGVPLLLFF 1330


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 88  EPSRSLPHNCL 120
           +P R LP NCL
Sbjct: 107 DPDRFLPENCL 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,949
Number of Sequences: 336
Number of extensions: 3715
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)