Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0872
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    31   5.1  
M12140-2|AAA88027.1|  564|Homo sapiens envelope protein protein.       30   6.7  

>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 385 LCKWVRYSICEPVCASSYTCL 323
           LC WV   +C PVC  ++ C+
Sbjct: 5   LCVWVHICVCVPVCVGAHLCV 25


>M12140-2|AAA88027.1|  564|Homo sapiens envelope protein protein.
          Length = 564

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -1

Query: 451 HTLYECLRACEGPSNIHSQT*RLCKWVRYSICEPVCASSYTC 326
           HT YEC   C G    H+QT        YS+C+P     Y C
Sbjct: 8   HTYYECAGTCLGTCT-HNQT-------TYSVCDPGRGQPYVC 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,285,521
Number of Sequences: 237096
Number of extensions: 2112282
Number of successful extensions: 4553
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4525
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)