Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0872
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63736-1|AAB17547.1|  727|Drosophila melanogaster secreted axon ...    30   2.6  
U60316-1|AAB17533.1|  727|Drosophila melanogaster Netrin-A protein.    30   2.6  
AY089580-1|AAL90318.1|  667|Drosophila melanogaster RE11206p pro...    30   2.6  
AE014298-2044|AAF48380.3|  726|Drosophila melanogaster CG18657-P...    30   2.6  
AF160879-1|AAD46820.1|  402|Drosophila melanogaster GH07762p pro...    29   4.5  
AE014134-2437|AAF53360.2|  402|Drosophila melanogaster CG33119-P...    29   4.5  
AE013599-3878|AAF47210.1|  706|Drosophila melanogaster CG13579-P...    29   4.5  

>U63736-1|AAB17547.1|  727|Drosophila melanogaster secreted axon
           guidance molecule protein.
          Length = 727

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 423 HARKHSYNV*IFARISVAGIKISGSMSNTVTHIRTNTQTRKCRTTFANDYAKFSLHSWFS 602
           HAR+  +N+ IF R+S     +SG +     H  T     +C+  F  D  K   H    
Sbjct: 374 HARQCRFNMEIF-RLSQG---VSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTH---R 426

Query: 603 KLCRFFNRHP 632
           K+C+  + HP
Sbjct: 427 KVCKACDCHP 436


>U60316-1|AAB17533.1|  727|Drosophila melanogaster Netrin-A protein.
          Length = 727

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 423 HARKHSYNV*IFARISVAGIKISGSMSNTVTHIRTNTQTRKCRTTFANDYAKFSLHSWFS 602
           HAR+  +N+ IF R+S     +SG +     H  T     +C+  F  D  K   H    
Sbjct: 374 HARQCRFNMEIF-RLSQG---VSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTH---R 426

Query: 603 KLCRFFNRHP 632
           K+C+  + HP
Sbjct: 427 KVCKACDCHP 436


>AY089580-1|AAL90318.1|  667|Drosophila melanogaster RE11206p
           protein.
          Length = 667

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 423 HARKHSYNV*IFARISVAGIKISGSMSNTVTHIRTNTQTRKCRTTFANDYAKFSLHSWFS 602
           HAR+  +N+ IF R+S     +SG +     H  T     +C+  F  D  K   H    
Sbjct: 374 HARQCRFNMEIF-RLSQG---VSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTH---R 426

Query: 603 KLCRFFNRHP 632
           K+C+  + HP
Sbjct: 427 KVCKACDCHP 436


>AE014298-2044|AAF48380.3|  726|Drosophila melanogaster CG18657-PA
           protein.
          Length = 726

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 423 HARKHSYNV*IFARISVAGIKISGSMSNTVTHIRTNTQTRKCRTTFANDYAKFSLHSWFS 602
           HAR+  +N+ IF R+S     +SG +     H  T     +C+  F  D  K   H    
Sbjct: 374 HARQCRFNMEIF-RLSQG---VSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTH---R 426

Query: 603 KLCRFFNRHP 632
           K+C+  + HP
Sbjct: 427 KVCKACDCHP 436


>AF160879-1|AAD46820.1|  402|Drosophila melanogaster GH07762p
           protein.
          Length = 402

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = +1

Query: 112 NCLPSCADDC-EGNG-CIAIFIVR 177
           +CLP C+D+C +GNG CIA  + R
Sbjct: 277 SCLPECSDNCGQGNGVCIAPGVCR 300


>AE014134-2437|AAF53360.2|  402|Drosophila melanogaster CG33119-PA
           protein.
          Length = 402

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
 Frame = +1

Query: 112 NCLPSCADDC-EGNG-CIAIFIVR 177
           +CLP C+D+C +GNG CIA  + R
Sbjct: 277 SCLPECSDNCGQGNGVCIAPGVCR 300


>AE013599-3878|AAF47210.1|  706|Drosophila melanogaster CG13579-PA
           protein.
          Length = 706

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 145 GNGCIAIFIVRDVYCVAYLHQKKSH-KNSMAVNDV 246
           G  C+ IF++ +    AY+HQ+  +   S+A+ND+
Sbjct: 53  GANCLVIFVINNRRYAAYIHQQPRYLLTSLALNDL 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,790,335
Number of Sequences: 53049
Number of extensions: 696042
Number of successful extensions: 3510
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3441
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)