Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0871
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.9  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.7  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 610 PASQYQWL---HLGEGTANAN 557
           P   Y W+   HLG+ T NAN
Sbjct: 197 PPQIYPWMKRVHLGQSTVNAN 217


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 610 PASQYQWL---HLGEGTANAN 557
           P   Y W+   HLG+ T NAN
Sbjct: 197 PPQIYPWMKRVHLGQSTVNAN 217


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 610 PASQYQWL---HLGEGTANAN 557
           P   Y W+   HLG+ T NAN
Sbjct: 197 PPQIYPWMKRVHLGQSTVNAN 217


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 610 PASQYQWL---HLGEGTANAN 557
           P   Y W+   HLG+ T NAN
Sbjct: 197 PPQIYPWMKRVHLGQSTVNAN 217


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 610 PASQYQWL---HLGEGTANAN 557
           P   Y W+   HLG+ T NAN
Sbjct: 197 PPQIYPWMKRVHLGQSTVNAN 217


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 610 PASQYQWL---HLGEGTANAN 557
           P   Y W+   HLG+ T NAN
Sbjct: 153 PPQIYPWMKRVHLGQSTVNAN 173


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 610 PASQYQWL---HLGEGTANAN 557
           P   Y W+   HLG+ T NAN
Sbjct: 197 PPQIYPWMKRVHLGQSTVNAN 217


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -3

Query: 610 PASQYQWL---HLGEGTANAN 557
           P   Y W+   HLG+ T NAN
Sbjct: 197 PPQIYPWMKRVHLGQSTVNAN 217


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 205 YTSFFKEVWERKGEIERPSAWSSPAPRTTCP 297
           YTS   E+W+      RP +    AP    P
Sbjct: 223 YTSICIEIWQSSESSLRPRSSQKSAPGKRTP 253


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = -3

Query: 712 KTKKRME*LSKKFRGDFLEITRVPDAGNRNAARKPASQYQWLHLGEGTANANLVFKSV 539
           K  ++M  LSK    D          GN  + R  A Q  WL+  +G   A  V K V
Sbjct: 326 KALEKMSELSKLGGEDLFRTMANAAPGNSASNRHSAWQSHWLN--KGAEQAKNVLKCV 381


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,348
Number of Sequences: 336
Number of extensions: 3431
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)