Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0866
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069688-1|AAL39833.1|  245|Drosophila melanogaster LD45860p pro...   137   2e-32
AF215730-1|AAF19529.1|  245|Drosophila melanogaster proteasome r...   137   2e-32
AE014298-1865|AAF48241.1|  245|Drosophila melanogaster CG1591-PA...   137   2e-32
AE014298-561|AAF45895.3|  398|Drosophila melanogaster CG32779-PA...    31   2.0  
BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p pro...    29   7.9  
BT011155-1|AAR82823.1|  745|Drosophila melanogaster AT29074p pro...    29   7.9  
AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD...    29   7.9  

>AY069688-1|AAL39833.1|  245|Drosophila melanogaster LD45860p
           protein.
          Length = 245

 Score =  137 bits (331), Expect = 2e-32
 Identities = 75/136 (55%), Positives = 87/136 (63%)
 Frame = +1

Query: 265 IEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGV 444
           + G  V  LP G+VPCNKPL ++I +VKP IR+LVEDSNLLKMWISFMIPKIEDGNNFGV
Sbjct: 87  VSGQPVMGLPAGTVPCNKPLCEMIKVVKPIIRKLVEDSNLLKMWISFMIPKIEDGNNFGV 146

Query: 445 SIQEDTLAEIQSVESEAAAFFVKSHDISYPGLK*YPKLPNTPTLMTTEELLGNWMKKNIC 624
           SIQEDTLAEIQ+VESEAAAFF +         K   K+   P +      +    +K   
Sbjct: 147 SIQEDTLAEIQTVESEAAAFFDQISRYFLSRAKVVSKVAKYPHIDDYRRAVVELDEKEYL 206

Query: 625 HSGW*CARFRNRYCSL 672
                    RNRY SL
Sbjct: 207 SLWLVVCEVRNRYSSL 222



 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 48/82 (58%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
 Frame = +2

Query: 11  DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
           D   KVQ+YKDSL LKAE LI KGFPE IV+LNELL T  F  RN  +VHQDLNIP+  P
Sbjct: 4   DTVVKVQEYKDSLILKAELLITKGFPENIVRLNELLATPIFNERNFEEVHQDLNIPV-LP 62

Query: 191 PATSNNEPN------AKRQRLD 238
           P    NE         KRQR+D
Sbjct: 63  PLLVKNELEDRDSLPTKRQRVD 84


>AF215730-1|AAF19529.1|  245|Drosophila melanogaster proteasome
           regulator dREG protein.
          Length = 245

 Score =  137 bits (331), Expect = 2e-32
 Identities = 75/136 (55%), Positives = 87/136 (63%)
 Frame = +1

Query: 265 IEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGV 444
           + G  V  LP G+VPCNKPL ++I +VKP IR+LVEDSNLLKMWISFMIPKIEDGNNFGV
Sbjct: 87  VSGQPVMGLPAGTVPCNKPLCEMIKVVKPIIRKLVEDSNLLKMWISFMIPKIEDGNNFGV 146

Query: 445 SIQEDTLAEIQSVESEAAAFFVKSHDISYPGLK*YPKLPNTPTLMTTEELLGNWMKKNIC 624
           SIQEDTLAEIQ+VESEAAAFF +         K   K+   P +      +    +K   
Sbjct: 147 SIQEDTLAEIQTVESEAAAFFDQISRYFLSRAKVVSKVAKYPHIDDYRRAVVELDEKEYL 206

Query: 625 HSGW*CARFRNRYCSL 672
                    RNRY SL
Sbjct: 207 SLWLVVCEVRNRYSSL 222



 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 48/82 (58%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
 Frame = +2

Query: 11  DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
           D   KVQ+YKDSL LKAE LI KGFPE IV+LNELL T  F  RN  +VHQDLNIP+  P
Sbjct: 4   DTVVKVQEYKDSLILKAELLITKGFPENIVRLNELLATPIFNERNFEEVHQDLNIPV-LP 62

Query: 191 PATSNNEPN------AKRQRLD 238
           P    NE         KRQR+D
Sbjct: 63  PLLVKNELEDRDSLPTKRQRVD 84


>AE014298-1865|AAF48241.1|  245|Drosophila melanogaster CG1591-PA
           protein.
          Length = 245

 Score =  137 bits (331), Expect = 2e-32
 Identities = 75/136 (55%), Positives = 87/136 (63%)
 Frame = +1

Query: 265 IEGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGV 444
           + G  V  LP G+VPCNKPL ++I +VKP IR+LVEDSNLLKMWISFMIPKIEDGNNFGV
Sbjct: 87  VSGQPVMGLPAGTVPCNKPLCEMIKVVKPIIRKLVEDSNLLKMWISFMIPKIEDGNNFGV 146

Query: 445 SIQEDTLAEIQSVESEAAAFFVKSHDISYPGLK*YPKLPNTPTLMTTEELLGNWMKKNIC 624
           SIQEDTLAEIQ+VESEAAAFF +         K   K+   P +      +    +K   
Sbjct: 147 SIQEDTLAEIQTVESEAAAFFDQISRYFLSRAKVVSKVAKYPHIDDYRRAVVELDEKEYL 206

Query: 625 HSGW*CARFRNRYCSL 672
                    RNRY SL
Sbjct: 207 SLWLVVCEVRNRYSSL 222



 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 48/82 (58%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
 Frame = +2

Query: 11  DVAKKVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTP 190
           D   KVQ+YKDSL LKAE LI KGFPE IV+LNELL T  F  RN  +VHQDLNIP+  P
Sbjct: 4   DTVVKVQEYKDSLILKAELLITKGFPENIVRLNELLATPIFNERNFEEVHQDLNIPV-LP 62

Query: 191 PATSNNEPN------AKRQRLD 238
           P    NE         KRQR+D
Sbjct: 63  PLLVKNELEDRDSLPTKRQRVD 84


>AE014298-561|AAF45895.3|  398|Drosophila melanogaster CG32779-PA
           protein.
          Length = 398

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 110 ELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSE 247
           ELLE  +  N  L      LN  +P PP TS++  NA      S++
Sbjct: 147 ELLELDHRYNSGLQAELGQLNATLPPPPPTSSSAQNASNHTQQSTQ 192


>BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p protein.
          Length = 1354

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/61 (31%), Positives = 35/61 (57%)
 Frame = +2

Query: 77   KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
            + +P K++   + L  S+++  +L    Q+ N P+P PP T +N     R+R DSS ++T
Sbjct: 1074 RNYP-KVLPTEQDLINSSYKRNSLPP--QNFNAPLP-PPRTISN--TLGRRRRDSSNITT 1127

Query: 257  T 259
            +
Sbjct: 1128 S 1128


>BT011155-1|AAR82823.1|  745|Drosophila melanogaster AT29074p
           protein.
          Length = 745

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/61 (31%), Positives = 35/61 (57%)
 Frame = +2

Query: 77  KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
           + +P K++   + L  S+++  +L    Q+ N P+P PP T +N     R+R DSS ++T
Sbjct: 465 RNYP-KVLPTEQDLINSSYKRNSLPP--QNFNAPLP-PPRTISN--TLGRRRRDSSNITT 518

Query: 257 T 259
           +
Sbjct: 519 S 519


>AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD
            protein.
          Length = 1354

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/61 (31%), Positives = 35/61 (57%)
 Frame = +2

Query: 77   KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPNAKRQRLDSSELST 256
            + +P K++   + L  S+++  +L    Q+ N P+P PP T +N     R+R DSS ++T
Sbjct: 1074 RNYP-KVLPTEQDLINSSYKRNSLPP--QNFNAPLP-PPRTISN--TLGRRRRDSSNITT 1127

Query: 257  T 259
            +
Sbjct: 1128 S 1128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,659,376
Number of Sequences: 53049
Number of extensions: 638280
Number of successful extensions: 2109
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)