Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0865
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.58 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   7.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   7.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.4  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 296 KINIFKFITDVKNIFIHLLKTYTCFFFLIP 207
           K++  K     K   IHLL+ Y C F L P
Sbjct: 259 KVDPLKIPEAEKRKLIHLLQEYRCIFSLRP 288


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 240  KNVYMFFFFNSILVSIGGCVQL 175
            K+V+ FF FN++ V +   +QL
Sbjct: 1267 KSVFAFFMFNALFVLVVFLLQL 1288


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 240  KNVYMFFFFNSILVSIGGCVQL 175
            K+V+ FF FN++ V +   +QL
Sbjct: 1267 KSVFAFFMFNALFVLVVFLLQL 1288


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 384 FTTQTVFL---FWFFLPSGC*GTLMYELLCFYFYFC 482
           FT   +FL   ++F +P       ++ LLC Y+++C
Sbjct: 123 FTVHLLFLLCIYYFVVP-------LFFLLCIYYFYC 151



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 456 LLCFYFYFC 482
           LLC Y+++C
Sbjct: 282 LLCIYYFYC 290


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 380 LTNI*FYLLNCLITTE-PIFFAFQRLQTQKINIFKFITDVK 261
           L +I F +    IT + PI+     ++T K+N+FK I ++K
Sbjct: 378 LRDIIFAIRQHAITAKFPIYLYRMSVET-KLNVFKRIGNIK 417


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 380 LTNI*FYLLNCLITTE-PIFFAFQRLQTQKINIFKFITDVK 261
           L +I F +    IT + PI+     ++T K+N+FK I ++K
Sbjct: 380 LRDIIFAIRQHAITAKFPIYLYRMSVET-KLNVFKRIGNIK 419


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 318 CKKYWFCCNQT 350
           C +YW C N T
Sbjct: 112 CTRYWTCWNGT 122


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 110 FVQFLAILNEDERRHRVNVVLAGDVLALINV 18
           F+Q LAI+ E E   R  V L  D     N+
Sbjct: 328 FIQLLAIVPEKEESSRQAVNLICDKFERSNI 358


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 110 FVQFLAILNEDERRHRVNVVLAGDVLALINV 18
           F+Q LAI+ E E   R  V L  D     N+
Sbjct: 328 FIQLLAIVPEKEESSRQAVNLICDKFERSNI 358


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,062
Number of Sequences: 336
Number of extensions: 3587
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)