Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0865
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    62   2e-11
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   5.1  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   6.8  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.0  
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        23   9.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.0  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 61.7 bits (143), Expect = 2e-11
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = +3

Query: 9   VKVDVDECEDIASEYNINSMPTFVFVKNGKKLDEFSGANVD 131
           VKVDVDECE++A++YNI SMPTF+F+K  + + +FSGAN +
Sbjct: 56  VKVDVDECEELAAQYNIASMPTFLFIKRKEVVGQFSGANAE 96


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 386 KLLTNI*FYLLNCLITTEPIFFAFQRLQTQKINIFKFITDVKNIFIHLLKTYTC 225
           KLL+ +    L+C+I    I    Q+   +  NIF+ +  VK   + L     C
Sbjct: 530 KLLSKVIKPRLDCIIGKWGIISTAQKCCNKPCNIFQAVLSVKERVVDLKMKRKC 583


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 548 FKNFCK*QVSQCFFFLCYASRS 613
           F+ FC  +V+  FF  CYA  S
Sbjct: 69  FEGFCIAEVNGVFFCSCYAPPS 90


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 175 LVSIYLCLRIVVLSLSTLAPE 113
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 175 LVSIYLCLRIVVLSLSTLAPE 113
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = -2

Query: 257 IFIHLLKTYTCFFFLIPS*FPSAAAYNFSLY---LLVFKDSCFEFVDVSAREFVQFLAIL 87
           +  H    Y  +F         +   N SLY   + VFK +    ++   ++ V F A L
Sbjct: 35  LLFHKHPRYIAYFDFTDDPNAQSLVDNKSLYDQAIHVFK-AVGALIEYGFKDPVLFDATL 93

Query: 86  NEDERRHRVNVVLAGDVLALINVHLH 9
            +  RRH+   V   D+L +  V L+
Sbjct: 94  RKITRRHKDRPVYTEDILTIGEVLLN 119


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 625  TPCLMRFKVSVPTSTYP 675
            TP LM+F+     +TYP
Sbjct: 1103 TPTLMKFEFEASATTYP 1119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,769
Number of Sequences: 2352
Number of extensions: 12315
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)