Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0863
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   3.1  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   3.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.5  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YLRVTSSATSEDINLDYF 319
           Y    + A  EDIN+DYF
Sbjct: 121 YSTTITRARFEDINMDYF 138


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YLRVTSSATSEDINLDYF 319
           Y    + A  EDIN+DYF
Sbjct: 121 YSTTITRARFEDINMDYF 138


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/35 (22%), Positives = 15/35 (42%)
 Frame = +1

Query: 475 LSSFQCSSGCMFLIILL*ACIKMLSYLSHVTVDNY 579
           +S F C    +    L+  C+  L +  H++   Y
Sbjct: 372 ISDFDCDINSIQYFCLMARCLNTLIFYYHISTYEY 406


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 550 YLSHVTVDNYKSESQTLYW 606
           YL+ + V + KS+S   YW
Sbjct: 14  YLTAIYVSSRKSDSGIWYW 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,568
Number of Sequences: 336
Number of extensions: 3371
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)