Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0863
(688 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 24 1.2
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 6.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 6.3
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 21 8.3
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 8.3
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 8.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 8.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 8.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 8.3
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 21 8.3
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.2
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +2
Query: 659 YLIMCFIFLF 688
YL+MCF+F+F
Sbjct: 307 YLVMCFVFVF 316
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VPV CG
Sbjct: 109 YYNINYIEQIPVPVPVPVYCG 129
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 108 YYNINYIEQVPVPIPVPIYCG 128
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 233 CSLLSPKIKHMCNKLIKY 180
C+ + K KH NK++ Y
Sbjct: 72 CNKCNEKQKHTANKVVNY 89
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 107 YYNINYIEQIPVPVPVPIYCG 127
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 107 YYNINYIEQIPVPVPVPIYCG 127
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 110 YYNINYIEQIPVPVPVPIYCG 130
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 113 YYNINYIEQIPVPVPVPIYCG 133
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 118 YYNINYIEQIPVPVPVPIYCG 138
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 345 YYNINYIEQIPVPVPVPIYCG 365
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 376 YFNIIYETVEPPGYSVPVSCG 438
Y+NI Y P VP+ CG
Sbjct: 352 YYNINYIEQIPVPVPVPIYCG 372
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 233 CSLLSPKIKHMCNKLIKY 180
C+ + K KH NK++ Y
Sbjct: 72 CNKCNEKQKHTANKVVNY 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,666
Number of Sequences: 438
Number of extensions: 3569
Number of successful extensions: 37
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -