Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0861
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.25 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.25 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   9.3  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.25
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 289 CSLAFAILFVLLDFDYN 239
           C  AF+ LF++L FD N
Sbjct: 358 CGSAFSYLFIMLQFDLN 374


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.25
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 289 CSLAFAILFVLLDFDYN 239
           C  AF+ LF++L FD N
Sbjct: 343 CGSAFSYLFIMLQFDLN 359


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
 Frame = -2

Query: 337 EGLTGFPNPIVNFI---VGCSLAFAILFVLLDF 248
           E L    N  VNF     G  +AF I F  LDF
Sbjct: 201 ETLAQILNQTVNFYNSAFGWPIAFLIFFATLDF 233


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 188 SLMINSFINGGISIEFGNMTSA 123
           S M+NS + GG+++    MTS+
Sbjct: 51  SSMLNSGMPGGMAMNGNGMTSS 72


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 252 SNRTNKIAKANEQPTIKFTMGLGKPVSPSLYD 347
           +NR N++ +  E   ++  M  G   +PS ++
Sbjct: 82  TNRKNRVLQWREPEELRRLMDFGVRSAPSTHE 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,760
Number of Sequences: 336
Number of extensions: 2113
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)