Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0861
         (446 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ355971-1|ABC67469.1| 1711|Homo sapiens CDC42 binding protein k...    29   5.5  
BC047871-1|AAH47871.1|  933|Homo sapiens CDC42BPB protein protein.     29   5.5  
AF128625-1|AAD37506.1| 1711|Homo sapiens CDC42-binding protein k...    29   5.5  
AB032950-1|BAA86438.2| 1760|Homo sapiens KIAA1124 protein protein.     29   5.5  

>DQ355971-1|ABC67469.1| 1711|Homo sapiens CDC42 binding protein
           kinase beta (DMPK-like) protein.
          Length = 1711

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 186 RS*KERTRNLQRLHDAPQL*SKSNRTNKIAKANEQ 290
           R  +E T+ +Q LH + +  S SNR  +I K NE+
Sbjct: 459 RKLQESTQTVQSLHGSSRALSNSNRDKEIKKLNEE 493


>BC047871-1|AAH47871.1|  933|Homo sapiens CDC42BPB protein protein.
          Length = 933

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 186 RS*KERTRNLQRLHDAPQL*SKSNRTNKIAKANEQ 290
           R  +E T+ +Q LH + +  S SNR  +I K NE+
Sbjct: 459 RKLQESTQTVQSLHGSSRALSNSNRDKEIKKLNEE 493


>AF128625-1|AAD37506.1| 1711|Homo sapiens CDC42-binding protein
           kinase beta protein.
          Length = 1711

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 186 RS*KERTRNLQRLHDAPQL*SKSNRTNKIAKANEQ 290
           R  +E T+ +Q LH + +  S SNR  +I K NE+
Sbjct: 459 RKLQESTQTVQSLHGSSRALSNSNRDKEIKKLNEE 493


>AB032950-1|BAA86438.2| 1760|Homo sapiens KIAA1124 protein protein.
          Length = 1760

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 186 RS*KERTRNLQRLHDAPQL*SKSNRTNKIAKANEQ 290
           R  +E T+ +Q LH + +  S SNR  +I K NE+
Sbjct: 508 RKLQESTQTVQSLHGSSRALSNSNRDKEIKKLNEE 542


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,188,423
Number of Sequences: 237096
Number of extensions: 1115366
Number of successful extensions: 1350
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)