Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0861
         (446 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   4.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.1  

>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 10  KLPNITEIYRTSYKTDYQLIPKREETRLLE 99
           K   +T I   ++KT+ Q+    + TRL E
Sbjct: 80  KFQTVTSIEGNTFKTETQVNDSLKVTRLYE 109


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 413 FYFYLNNINSTTLVNLL 363
           +YF  N I+ TTL +L+
Sbjct: 393 YYFESNKIDETTLKHLI 409


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 7   EKLPNITEIYRTSYKTDYQLIPKREETRLLESINTI 114
           E +  + E  + + +  YQ+IPK+   RL    N I
Sbjct: 379 ESMRKLDEEMKRTDELLYQMIPKQVADRLRNGENPI 414


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 413 FYFYLNNINSTTLVNLL 363
           +YF  N I+ TTL +L+
Sbjct: 393 YYFESNKIDETTLKHLI 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,073
Number of Sequences: 438
Number of extensions: 2472
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)