Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0860
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.55 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.0  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 553 WPQEAIAFLWDFSDFHTVSDKP*RPSPLKLNNL 651
           WP EA+  L  F  +  V+ +  R  PLK++ L
Sbjct: 2   WPPEAVHSLERFCTYGNVNYRQRRSQPLKISCL 34


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 105 EHLNTITITKSVQSTKTNL 49
           E  NT+T+T +VQS  T L
Sbjct: 129 EQKNTVTVTFTVQSDDTTL 147


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 228 YNAIYCQIAKHTILSLCGIFWIIIGMWYRI*KRCRDGTQSV 350
           +N ++C +A   +L L   F  +     ++ K C    QSV
Sbjct: 533 FNVVHCYLASELVLMLKNRFVTLNVQLTKLTKNCATKAQSV 573


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 82  YCNCIEMFFLYHYVLFSIYIVTSVRVTPS 168
           YCN I +F+L  +V+   Y   S+  TP+
Sbjct: 321 YCNFIILFYLSVFVILVYY--ASLDETPN 347


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 111 IPLRIIFDLYCYIGKS 158
           IPL I+  LYC I K+
Sbjct: 248 IPLIILLILYCIIAKN 263


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 102 VLFIPLRIIFDLY 140
           +LF+P R+ FDL+
Sbjct: 329 LLFVPRRVPFDLF 341


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 46  NEIRFCTLYAFSYCNCIEMFFLYHYV 123
           N+ ++CT       NC+ + F  +Y+
Sbjct: 243 NQAKYCTTLIGLIKNCVIVIFELYYL 268


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 587 LVIFIPLVINPKDLVH*N*IIS 652
           L  F+PLV+N  D +  N I+S
Sbjct: 187 LFSFVPLVVNALDHLFLNDILS 208


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 587 LVIFIPLVINPKDLVH*N*IIS 652
           L  F+PLV+N  D +  N I+S
Sbjct: 143 LFSFVPLVVNALDHLFLNDILS 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,623
Number of Sequences: 336
Number of extensions: 3088
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)