Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0860
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.         30   3.2  
M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein ( D.me...    30   3.2  
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB...    30   3.2  
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ...    30   3.2  
U35631-1|AAF06674.1|  227|Drosophila melanogaster MEI-217 protein.     28   9.8  
AE014298-2525|AAO41688.1|  223|Drosophila melanogaster CG33935-P...    28   9.8  

>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
          Length = 2483

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 231  NAIYCQIAKHTILSLCGIFWIIIGMWYRI*KRCRDGTQSVS 353
            NA  C++    I +L  I   ++G W+RI +RCR G  S S
Sbjct: 1810 NAQLCEVIGGAI-TLDTIRHTVLGWWHRIRERCRQGCSSGS 1849


>M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein (
            D.melanogaster pecanexgene, exons 1 (partial) and 2. ).
          Length = 1938

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 231  NAIYCQIAKHTILSLCGIFWIIIGMWYRI*KRCRDGTQSVS 353
            NA  C++    I +L  I   ++G W+RI +RCR G  S S
Sbjct: 1265 NAQLCEVIGGAI-TLDTIRHTVLGWWHRIRERCRQGCSSGS 1304


>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
            EG:30B8.4,FBgn0003048;pcx protein.
          Length = 3345

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 231  NAIYCQIAKHTILSLCGIFWIIIGMWYRI*KRCRDGTQSVS 353
            NA  C++    I +L  I   ++G W+RI +RCR G  S S
Sbjct: 2673 NAQLCEVIGGAI-TLDTIRHTVLGWWHRIRERCRQGCSSGS 2712


>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
            protein.
          Length = 3433

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 231  NAIYCQIAKHTILSLCGIFWIIIGMWYRI*KRCRDGTQSVS 353
            NA  C++    I +L  I   ++G W+RI +RCR G  S S
Sbjct: 2761 NAQLCEVIGGAI-TLDTIRHTVLGWWHRIRERCRQGCSSGS 2800


>U35631-1|AAF06674.1|  227|Drosophila melanogaster MEI-217 protein.
          Length = 227

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 378 YFASSSSDY*LTACHL 331
           YFASS+S Y L ACHL
Sbjct: 209 YFASSASTYQLEACHL 224


>AE014298-2525|AAO41688.1|  223|Drosophila melanogaster CG33935-PA,
           isoform A protein.
          Length = 223

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 378 YFASSSSDY*LTACHL 331
           YFASS+S Y L ACHL
Sbjct: 205 YFASSASTYQLEACHL 220


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,301,739
Number of Sequences: 53049
Number of extensions: 501406
Number of successful extensions: 1106
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)