Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0860
(660 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 2.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 4.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 4.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 4.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 4.5
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 4.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.0
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 6.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.0
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 46 NEIRFCTLYAFSYCNCIEMFFLYHY 120
NEIR F++ CI M + +Y
Sbjct: 206 NEIRIFVATIFTFSYCIPMILIIYY 230
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 180 LFGDRWRYSYRCNNINRK*Y 121
+ + ++Y+Y NN N+K Y
Sbjct: 90 IHNNNYKYNYNNNNYNKKLY 109
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 180 LFGDRWRYSYRCNNINRK*Y 121
+ + ++Y+Y NN N+K Y
Sbjct: 90 IHNNNYKYNYNNNNYNKKLY 109
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 180 LFGDRWRYSYRCNNINRK*Y 121
+ + ++Y+Y NN N+K Y
Sbjct: 90 IHNNNYKYNYNNNNYNKKLY 109
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 180 LFGDRWRYSYRCNNINRK*Y 121
+ + ++Y+Y NN N+K Y
Sbjct: 90 IHNNNYKYNYNNNNYNKKLY 109
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 106 RTSQYNYNN*KRTEYKNESHL 44
R ++ N N + +YKN++HL
Sbjct: 416 RCAKSNNQNNNQNKYKNQAHL 436
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -2
Query: 542 TIYKVNIVMRWVRDK*NSTELQFNTVISTIN 450
T+YK++ ++ DK T QF TV+++++
Sbjct: 149 TLYKLDEIIERNGDKPPLTYHQFQTVVASMD 179
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 257 THDTQLMWNILDNYRDVVSD 316
THD +N++ +RDV+ +
Sbjct: 257 THDIPETYNVVRKFRDVLDE 276
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -3
Query: 130 KIIRSGIKRTSQYNYNN*KRTEYKNESHLFIQ 35
KII S NYNN Y N ++ +Q
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -3
Query: 130 KIIRSGIKRTSQYNYNN*KRTEYKNESHLFIQ 35
KII S NYNN Y N ++ +Q
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -3
Query: 130 KIIRSGIKRTSQYNYNN*KRTEYKNESHLFIQ 35
KII S NYNN Y N ++ +Q
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -3
Query: 130 KIIRSGIKRTSQYNYNN*KRTEYKNESHLFIQ 35
KII S NYNN Y N ++ +Q
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 257 THDTQLMWNILDNYRDVVSD 316
THD +N++ +RDV+ +
Sbjct: 257 THDIPETYNVVRKFRDVLDE 276
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,558
Number of Sequences: 438
Number of extensions: 4244
Number of successful extensions: 29
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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