Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0859
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56257-1|AAC32928.1| 259|Drosophila melanogaster intronic prote... 164 9e-41
AY118472-1|AAM49841.1| 259|Drosophila melanogaster GM13959p pro... 164 9e-41
AE014134-1874|AAF52940.2| 259|Drosophila melanogaster CG5277-PA... 164 9e-41
BT029408-1|ABK57065.1| 134|Drosophila melanogaster IP02459p pro... 30 3.4
BT023293-1|AAY55709.1| 128|Drosophila melanogaster IP02458p pro... 30 3.4
AE014298-2843|AAF48956.2| 128|Drosophila melanogaster CG32531-P... 30 3.4
AY069745-1|AAL39890.1| 325|Drosophila melanogaster LP07727p pro... 29 7.9
AE013599-842|AAF58957.2| 325|Drosophila melanogaster CG2063-PA ... 29 7.9
>U56257-1|AAC32928.1| 259|Drosophila melanogaster intronic protein
259 protein.
Length = 259
Score = 164 bits (399), Expect = 9e-41
Identities = 81/111 (72%), Positives = 87/111 (78%)
Frame = +1
Query: 175 KTKA*RESWKMGCPHP*SESSSGRRSIKVLKSGKSKRKAWXRMVTKVTFVGEXFTRKPPK 354
K K ++ K P P + S KVLK+GK+KRKAW RMVTKVTFVGE FTRKPPK
Sbjct: 106 KQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKTGKTKRKAWKRMVTKVTFVGENFTRKPPK 165
Query: 355 FERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITKG 507
FERFIRPM LR KKAHVTHPELKATF LPIIGVKKNPSS M+TSLGVITKG
Sbjct: 166 FERFIRPMGLRMKKAHVTHPELKATFNLPIIGVKKNPSSPMFTSLGVITKG 216
Score = 95.5 bits (227), Expect = 6e-20
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +2
Query: 44 EKENQSARREECQTEHREGRXSALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 223
+K+ Q+ ++ + + + ALP YLLDR +QS AKVLSNMIKQKRKEKAGKWDVPIP
Sbjct: 62 KKKIQAHEEKKVKKQEEKVEDGALPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIP 121
Query: 224 KVRAQADAEVSK 259
KVRAQ+DAEV K
Sbjct: 122 KVRAQSDAEVFK 133
Score = 85.8 bits (203), Expect = 5e-17
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = +3
Query: 504 G*VIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 635
G VIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVLLV
Sbjct: 216 GTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVLLV 259
Score = 51.6 bits (118), Expect = 1e-06
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KYSXKERRNEKIQMKKKIKAHEEKNVKQNTEKVAE 107
K KERRNEKIQ+KKKI+AHEEK VK+ EKV +
Sbjct: 48 KLFNKERRNEKIQIKKKIQAHEEKKVKKQEEKVED 82
>AY118472-1|AAM49841.1| 259|Drosophila melanogaster GM13959p
protein.
Length = 259
Score = 164 bits (399), Expect = 9e-41
Identities = 81/111 (72%), Positives = 87/111 (78%)
Frame = +1
Query: 175 KTKA*RESWKMGCPHP*SESSSGRRSIKVLKSGKSKRKAWXRMVTKVTFVGEXFTRKPPK 354
K K ++ K P P + S KVLK+GK+KRKAW RMVTKVTFVGE FTRKPPK
Sbjct: 106 KQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKTGKTKRKAWKRMVTKVTFVGENFTRKPPK 165
Query: 355 FERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITKG 507
FERFIRPM LR KKAHVTHPELKATF LPIIGVKKNPSS M+TSLGVITKG
Sbjct: 166 FERFIRPMGLRMKKAHVTHPELKATFNLPIIGVKKNPSSPMFTSLGVITKG 216
Score = 95.5 bits (227), Expect = 6e-20
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +2
Query: 44 EKENQSARREECQTEHREGRXSALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 223
+K+ Q+ ++ + + + ALP YLLDR +QS AKVLSNMIKQKRKEKAGKWDVPIP
Sbjct: 62 KKKIQAHEEKKVKKQEEKVEDGALPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIP 121
Query: 224 KVRAQADAEVSK 259
KVRAQ+DAEV K
Sbjct: 122 KVRAQSDAEVFK 133
Score = 85.8 bits (203), Expect = 5e-17
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = +3
Query: 504 G*VIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 635
G VIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVLLV
Sbjct: 216 GTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVLLV 259
Score = 51.6 bits (118), Expect = 1e-06
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KYSXKERRNEKIQMKKKIKAHEEKNVKQNTEKVAE 107
K KERRNEKIQ+KKKI+AHEEK VK+ EKV +
Sbjct: 48 KLFNKERRNEKIQIKKKIQAHEEKKVKKQEEKVED 82
>AE014134-1874|AAF52940.2| 259|Drosophila melanogaster CG5277-PA
protein.
Length = 259
Score = 164 bits (399), Expect = 9e-41
Identities = 81/111 (72%), Positives = 87/111 (78%)
Frame = +1
Query: 175 KTKA*RESWKMGCPHP*SESSSGRRSIKVLKSGKSKRKAWXRMVTKVTFVGEXFTRKPPK 354
K K ++ K P P + S KVLK+GK+KRKAW RMVTKVTFVGE FTRKPPK
Sbjct: 106 KQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKTGKTKRKAWKRMVTKVTFVGENFTRKPPK 165
Query: 355 FERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITKG 507
FERFIRPM LR KKAHVTHPELKATF LPIIGVKKNPSS M+TSLGVITKG
Sbjct: 166 FERFIRPMGLRMKKAHVTHPELKATFNLPIIGVKKNPSSPMFTSLGVITKG 216
Score = 95.5 bits (227), Expect = 6e-20
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +2
Query: 44 EKENQSARREECQTEHREGRXSALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 223
+K+ Q+ ++ + + + ALP YLLDR +QS AKVLSNMIKQKRKEKAGKWDVPIP
Sbjct: 62 KKKIQAHEEKKVKKQEEKVEDGALPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIP 121
Query: 224 KVRAQADAEVSK 259
KVRAQ+DAEV K
Sbjct: 122 KVRAQSDAEVFK 133
Score = 85.8 bits (203), Expect = 5e-17
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = +3
Query: 504 G*VIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 635
G VIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVLLV
Sbjct: 216 GTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVLLV 259
Score = 51.6 bits (118), Expect = 1e-06
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +3
Query: 3 KYSXKERRNEKIQMKKKIKAHEEKNVKQNTEKVAE 107
K KERRNEKIQ+KKKI+AHEEK VK+ EKV +
Sbjct: 48 KLFNKERRNEKIQIKKKIQAHEEKKVKKQEEKVED 82
>BT029408-1|ABK57065.1| 134|Drosophila melanogaster IP02459p
protein.
Length = 134
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 134 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVS 256
RDV+ R V N +++ R K D+ P++R ADAE++
Sbjct: 42 RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEIA 82
>BT023293-1|AAY55709.1| 128|Drosophila melanogaster IP02458p
protein.
Length = 128
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 134 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVS 256
RDV+ R V N +++ R K D+ P++R ADAE++
Sbjct: 36 RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEIA 76
>AE014298-2843|AAF48956.2| 128|Drosophila melanogaster CG32531-PA
protein.
Length = 128
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 134 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVS 256
RDV+ R V N +++ R K D+ P++R ADAE++
Sbjct: 36 RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEIA 76
>AY069745-1|AAL39890.1| 325|Drosophila melanogaster LP07727p
protein.
Length = 325
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 131 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 223
D D +A L+ ++++ K++ KWD P P
Sbjct: 259 DMDKVEQATALARKVEEEAKKRKSKWDQPAP 289
>AE013599-842|AAF58957.2| 325|Drosophila melanogaster CG2063-PA
protein.
Length = 325
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 131 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 223
D D +A L+ ++++ K++ KWD P P
Sbjct: 259 DMDKVEQATALARKVEEEAKKRKSKWDQPAP 289
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,854,434
Number of Sequences: 53049
Number of extensions: 507652
Number of successful extensions: 1241
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -