Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0858
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 46 2e-05
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 38 0.005
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 34 0.089
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 34 0.089
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 34 0.089
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 34 0.089
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 34 0.089
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 34 0.089
L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z78059-1|CAH04725.2| 348|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +1
Query: 1 ALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKK 180
A E AL LE S+ ++ T + ND HL D++ ++LDEQ K + A + LK+
Sbjct: 95 AFEAALALEKFNNESLLKLHSTA-GNHNDAHLTDFIEEKYLDEQVKSINEFARMVANLKR 153
Query: 181 MMDKHAALGEFIFDKK 228
+ +GE++FDK+
Sbjct: 154 V---GPGVGEYVFDKE 166
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +1
Query: 1 ALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKK 180
A E AL LE S+ ++ E ND HL +Y+ ++L+EQ + A + +K+
Sbjct: 95 AFEAALALERANNASLLKLHGIAEQR-NDAHLTNYIQEKYLEEQVHSINEFARHIANIKR 153
Query: 181 MMDKHAALGEFIFDKK 228
LGE++FDK+
Sbjct: 154 ---AGPGLGEYLFDKE 166
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 PRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQE 179
P+ PQ + Q QD E L R+ P FV +P ++ P+RP + LD
Sbjct: 1950 PKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRVI 2009
Query: 180 DDGQTRRPRRVHLRQETPRIERI 248
R P L Q ++ +
Sbjct: 2010 APSLRREPTTTPLIQPVHPVQSV 2032
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 PRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQE 179
P+ PQ + Q QD E L R+ P FV +P ++ P+RP + LD
Sbjct: 1972 PKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRVI 2031
Query: 180 DDGQTRRPRRVHLRQETPRIERI 248
R P L Q ++ +
Sbjct: 2032 APSLRREPTTTPLIQPVHPVQSV 2054
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 PRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQE 179
P+ PQ + Q QD E L R+ P FV +P ++ P+RP + LD
Sbjct: 793 PKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRVI 852
Query: 180 DDGQTRRPRRVHLRQETPRIERI 248
R P L Q ++ +
Sbjct: 853 APSLRREPTTTPLIQPVHPVQSV 875
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 PRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQE 179
P+ PQ + Q QD E L R+ P FV +P ++ P+RP + LD
Sbjct: 771 PKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRVI 830
Query: 180 DDGQTRRPRRVHLRQETPRIERI 248
R P L Q ++ +
Sbjct: 831 APSLRREPTTTPLIQPVHPVQSV 853
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 PRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQE 179
P+ PQ + Q QD E L R+ P FV +P ++ P+RP + LD
Sbjct: 1950 PKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRVI 2009
Query: 180 DDGQTRRPRRVHLRQETPRIERI 248
R P L Q ++ +
Sbjct: 2010 APSLRREPTTTPLIQPVHPVQSV 2032
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 33.9 bits (74), Expect = 0.089
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 PRARPQAGE*RHQQHPGGHQD-LREQLQRLPPGRLFVRGIPRRTVQGPTRPRRQGLDPQE 179
P+ PQ + Q QD E L R+ P FV +P ++ P+RP + LD
Sbjct: 1972 PKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRVI 2031
Query: 180 DDGQTRRPRRVHLRQETPRIERI 248
R P L Q ++ +
Sbjct: 2032 APSLRREPTTTPLIQPVHPVQSV 2054
>L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical
protein F10E9.2 protein.
Length = 286
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 96 GRLFVRGIPRRTVQGPTRPRRQGLDPQEDDGQTRRPRRV 212
G L G R ++G TR R+G + G+TRR ++V
Sbjct: 110 GELSNNGAERGKIRGSTRATRKGSVNKSKSGRTRRHKKV 148
>Z78059-1|CAH04725.2| 348|Caenorhabditis elegans Hypothetical
protein C34B4.5 protein.
Length = 348
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 597 FFFFLMFTIYWVLIIKGK 544
FF FLMF IY ++++ GK
Sbjct: 264 FFIFLMFQIYNIIVLYGK 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,445,845
Number of Sequences: 27780
Number of extensions: 265774
Number of successful extensions: 611
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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