Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0854
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 56 3e-08
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 51 6e-07
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 50 1e-06
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 49 3e-06
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 48 8e-06
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 48 8e-06
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 47 1e-05
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 47 1e-05
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 47 1e-05
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 47 1e-05
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 46 2e-05
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 46 2e-05
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 45 4e-05
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 45 4e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 45 4e-05
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 45 6e-05
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 44 1e-04
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 44 1e-04
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 43 2e-04
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 43 2e-04
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 43 2e-04
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 43 2e-04
At5g61340.1 68418.m07697 expressed protein 42 3e-04
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 42 4e-04
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 40 0.001
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 40 0.001
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 39 0.004
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 38 0.005
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 38 0.008
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 37 0.011
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 36 0.019
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 36 0.025
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 36 0.025
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 36 0.034
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 36 0.034
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 35 0.059
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 35 0.059
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 34 0.078
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 34 0.078
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 33 0.18
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 33 0.24
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 33 0.24
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 32 0.31
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 32 0.31
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 32 0.31
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 31 0.96
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 31 0.96
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 31 0.96
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 31 0.96
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 30 1.7
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 29 2.2
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 29 3.9
At4g31240.2 68417.m04435 expressed protein 28 6.8
At4g31240.1 68417.m04434 expressed protein 28 6.8
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 28 6.8
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 27 8.9
At1g78740.1 68414.m09177 hypothetical protein 27 8.9
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +1
Query: 28 EIRAFV*KPKMSIHIKDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAE 201
EI F + IK+ + K+RL D KL+VI+F A WCGPCK + PKL+E+AA+
Sbjct: 28 EIYPFKVNSPCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAK 87
Query: 202 MSD 210
+D
Sbjct: 88 YTD 90
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 261 EYNINSMPTFVFVKNGKKLDEFSGANVD 344
E+N++++P VF+K G+++D G VD
Sbjct: 107 EFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 51.2 bits (117), Expect = 6e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 76 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
D D + AGDK+VV+D WCGPCK+I PK E++ + D +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMV 130
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 52 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE 201
P M I I ++ L +AGD+LV++DF TWCG C+ + PKL + A E
Sbjct: 93 PNM-IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE 141
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/37 (48%), Positives = 29/37 (78%)
Frame = +1
Query: 106 EAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
+ +KL+VIDF A WCGPCK + P++ EIA++ S+++
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAV 76
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 344
A Y ++P FVFVK G+++D GA D
Sbjct: 89 AGTYRAITLPAFVFVKRGEEIDRVVGAKPD 118
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 47.6 bits (108), Expect = 8e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 76 DSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
D D + AG+KLVV+D WCGPCK+I PK ++ + D +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVV 120
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +1
Query: 100 LAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
L + DK V++DF ATWCGPC+++ P L+E++ + D I
Sbjct: 71 LLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDII 109
Score = 34.3 bits (75), Expect = 0.078
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGA 335
A++Y I ++PTF+ K+GK D F GA
Sbjct: 123 ANKYQIEALPTFILFKDGKLWDRFEGA 149
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 58 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 207
+SIH + KT+ A+ +L+++ F ATWCGPC+ + P +A + S
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHS 322
Score = 36.3 bits (80), Expect = 0.019
Identities = 13/28 (46%), Positives = 24/28 (85%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGAN 338
A+ +NI+S+PTF F+++GK++D+ GA+
Sbjct: 338 AASWNISSVPTFCFIRDGKEVDKVVGAD 365
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +1
Query: 49 KPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 195
KP M + DL L AGDKLVV+DF + CG CK + PK+ +IA
Sbjct: 92 KPNMK-SVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIA 139
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +1
Query: 52 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E D +
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIV 156
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/55 (34%), Positives = 34/55 (61%)
Frame = +1
Query: 52 PKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
P M + I +++ + L+ AG++LV+++F TWC C+ + PKL + A E D +
Sbjct: 103 PNM-VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIV 156
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 67 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDS 213
H D ++ A+ +KL+VIDF A+WC PC+MI P +++A + S
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSS 60
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGAN 338
A E+ + +MPTFVF+K G+ +D+ GAN
Sbjct: 75 AKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1
Query: 64 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 207
I K+S D K A+ K+VV +F ATWCGPCK++ P E++ + S
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHS 75
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGAN 338
+S ++I + PTF F+KNG+++ + GAN
Sbjct: 91 SSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 210
+KL+V+DF A+WCGPC+MI P + +A + +D
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAMADKFND 78
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 344
A E+N+ +MPTFV VK GK+++ GA D
Sbjct: 93 AKEFNVTAMPTFVLVKRGKEIERIIGAKKD 122
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 45.2 bits (102), Expect = 4e-05
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
DK V++D+ ATWCGPC+ + P L+E++ + D I
Sbjct: 81 DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKI 114
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGA 335
A++Y I ++PTF+ K+G+ D F GA
Sbjct: 128 ANKYKIEALPTFILFKDGEPCDRFEGA 154
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1
Query: 70 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
I + +L L AGDKLVV+DF + CG CK + PK+ + AEM+ +
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQF-AEMNPDV 149
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 91 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
K + A KL+VIDF ATWC PC+ I P ++A + D +
Sbjct: 19 KLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGA 335
A E+ + +MPTF+F+K G+ + GA
Sbjct: 73 AEEFKVQAMPTFIFMKEGEIKETVVGA 99
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSIXXXXXXXXECEDMP 258
VV+DF A WCGPCKMI P ++++A + I E + P
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTP 145
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 44.0 bits (99), Expect = 1e-04
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
V+++F+ATWCGPCK+I P ++ ++ E D +
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKL 120
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +1
Query: 64 IHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 195
+ I+ ++ L L AGD+LVV+DF + CG CK + PK+ ++A
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLA 131
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +1
Query: 10 ACSAGLEIRAFV*KPKMSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDE 189
AC A A V P +S DS+ +T++ E+ D V+++F A WCGPC+MI P +D+
Sbjct: 75 ACEAQDTTAAAVEVPNLS----DSE-WQTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQ 128
Query: 190 IAAEMS 207
+A + +
Sbjct: 129 LAKDFA 134
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGA 335
A+ Y I S+PT + K G+K D GA
Sbjct: 151 ANRYGIRSVPTVIIFKGGEKKDSIIGA 177
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 91 KTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
K + A KL+VIDF A+WC PC+ I P E+A + ++ +
Sbjct: 19 KVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 344
A E+ + +MPTFVF+K G +D GA D
Sbjct: 73 AQEFKVEAMPTFVFMKEGNIIDRVVGAAKD 102
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 79 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIA 195
+D L D+ V +DF A WCGPCKMI P ++E+A
Sbjct: 80 NDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELA 118
>At5g61340.1 68418.m07697 expressed protein
Length = 326
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = -3
Query: 539 FFAFQRLQTQKLISSN-SLQTLKTFFIHLLKTYTC-FFFLIPS*FPSAAAYNFSLYLLVF 366
F + KL+S+N S + F++ LLKTY C FFFL+ SA A F+L+ L +
Sbjct: 98 FLLLSKAYVIKLLSNNHSADSSSVFYLRLLKTYVCNFFFLL-----SANASAFALFFLAY 152
Query: 365 KDSCFEFVDVSAREFVQFLAI 303
+ E S+R F FL++
Sbjct: 153 --NTLEAFGFSSRNFYTFLSL 171
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 58 MSIHIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEM 204
++ H ++ + + + A LVV+DF A+WCGPC+ I P ++A ++
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL 57
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 344
AS++ I +MPTF+F+K GK LD+ GA D
Sbjct: 74 ASDWAIQAMPTFMFLKEGKILDKVVGAKKD 103
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE-MSDSIXXXXXXXXECEDM 255
SD L + +G K V+++F A WCG C+ + P LDE+A SDS D
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATANDF 439
Query: 256 P 258
P
Sbjct: 440 P 440
Score = 37.5 bits (83), Expect = 0.008
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
+V++F A WCG CK + P+ ++ A+ +S ++
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNV 80
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 SDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAE-MSDSIXXXXXXXXECEDM 255
SD L + +G K V+++F A WCG C+ + P LDE+A SDS D
Sbjct: 381 SDSLDDIVLNSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATANDF 439
Query: 256 P 258
P
Sbjct: 440 P 440
Score = 37.5 bits (83), Expect = 0.008
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
+V++F A WCG CK + P+ ++ A+ +S ++
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNV 80
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +1
Query: 112 GDKLV--VIDFMATWCGPCKMIGPKLDEIAAE 201
GD+ V ++DF ATWCGPC ++ +L+ +A E
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVE 122
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 38.3 bits (85), Expect = 0.005
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
V+++F +WCGPC+M+ +DEIA + + +
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKL 117
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +1
Query: 49 KPKMSIHIKDSDDLKTRLAEAGD-------KLVVIDFMATWCGPCKMIGPKLDEIA 195
K I ++++ +K +AE+ D K V+I+F A WCG C+ + P LDE+A
Sbjct: 361 KKSQPIPAENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVA 416
Score = 36.3 bits (80), Expect = 0.019
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAEMS 207
+V++F A WCG C+ + P+ ++ A+E+S
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELS 76
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGANVD 344
AS+ + +MPTF+F+K+G +D+ GAN D
Sbjct: 70 ASQLEVKAMPTFLFLKDGNAMDKLVGANPD 99
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 36.3 bits (80), Expect = 0.019
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAEMSD 210
++I++MA+WC C + PKL+++AAE ++
Sbjct: 121 IIIEWMASWCRKCIYLKPKLEKLAAEYNN 149
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 70 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSD 210
+K ++ +++A D + V F A WCGPC+ I P + E++ + D
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPD 137
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 70 IKDSDDLKTRLAEAGDKLV--VIDFMATWCGPCKMIGPKLDEIAAEMSD 210
+K + + L++A D + V F A WCGPC++I P + E++ + D
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPD 102
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 35.5 bits (78), Expect = 0.034
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 118 KLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
K + + F A WCGPC+ P+L E+ E+S +
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNELSSKV 76
Score = 35.1 bits (77), Expect = 0.045
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 67 HIKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 210
++ D K +++ K +++ F A WC PC+ PKL E+ ++ +
Sbjct: 347 YVLGKDGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEVYKQIKE 394
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 35.5 bits (78), Expect = 0.034
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIA 195
+ +DF A WCG CK + P+LD A
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAA 75
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 34.7 bits (76), Expect = 0.059
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIAA 198
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
Score = 33.9 bits (74), Expect = 0.10
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIA 195
+K V+++F A WCG CK + P +++A
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVA 185
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 34.7 bits (76), Expect = 0.059
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIAA 198
DK +++F A WCG CK + P+ +++ A
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGA 67
Score = 33.9 bits (74), Expect = 0.10
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIA 195
+K V+++F A WCG CK + P +++A
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVA 185
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 34.3 bits (75), Expect = 0.078
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAE 201
VVI +MA WC C + PKL+++AAE
Sbjct: 101 VVIVWMAAWCRKCIYLKPKLEKLAAE 126
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 34.3 bits (75), Expect = 0.078
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 49 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
+P S+ + S D+L T E L +++F A WCG CK + P+ + A + +
Sbjct: 161 EPSASVELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKV 214
Score = 31.9 bits (69), Expect = 0.41
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +1
Query: 121 LVVIDFMATWCGPCKMIGPKLDEIAAEM 204
+V+++F A WCG C+ + P +++A+ +
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTL 75
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/27 (40%), Positives = 22/27 (81%)
Frame = +3
Query: 255 ASEYNINSMPTFVFVKNGKKLDEFSGA 335
++E+N+ + PT VF+K+G+++D+ GA
Sbjct: 54 SNEWNVEATPTVVFLKDGRQMDKLVGA 80
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 103 AEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
A + K++V++F A+WC P K I P E+A+ + I
Sbjct: 58 ANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMI 95
Score = 31.5 bits (68), Expect = 0.55
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 261 EYNINSMPTFVFVKNGKKLDEFSGAN 338
E+N+++ PT VF+K+G+++D+ G +
Sbjct: 110 EWNVDATPTVVFLKDGRQMDKLVGGD 135
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 32.7 bits (71), Expect = 0.24
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 121 LVVIDFMATWCGPCKMIGPKLDEIA 195
+V+++F A WCG CK + P +++A
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVA 74
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 49 KPKMSIHIKDS--DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
+P S+ + S DDL ++L +++F A WCG CK + P+ A + +
Sbjct: 160 EPSASVELNASNFDDLVIE----SNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKV 213
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 32.3 bits (70), Expect = 0.31
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 210
++ V+++F A WCG C+ + P+ A E+ +
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKE 151
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 118 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 204
K V+++ A WCG C+ + P +++A +
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHL 488
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 32.3 bits (70), Expect = 0.31
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 210
++ V+++F A WCG C+ + P+ A E+ +
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKE 151
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 118 KLVVIDFMATWCGPCKMIGPKLDEIAAEM 204
K V+++ A WCG C+ + P +++A +
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHL 488
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 112 GDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
G KL+V+D CGPC + P + +++ MS+++
Sbjct: 206 GGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETV 240
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 30.7 bits (66), Expect = 0.96
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 124 VVIDFMATWCGPCKMIGPKLDEIAAE 201
V++ F A WCGPC+ + P L+++ +E
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSE 255
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 73 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 210
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 104 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 151
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 73 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 210
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 138
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 73 KDSDDLKTRLAEAGD--KLVVIDFMATWCGPCKMIGPKLDEIAAEMSD 210
K D+L + L ++ + LVV+DF T CG CK I ++ + D
Sbjct: 91 KTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGD 138
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 264 YNINSMPTFVFVKNGKKLDEFSGAN 338
Y++ ++P FVF K+GK +D GA+
Sbjct: 70 YSVAAVPYFVFFKDGKTVDTLEGAD 94
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 115 DKLVVIDFMATWCGPCKMIGPKLDEIAAEM 204
+ +++F A WCG C+ + P+ A E+
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATEL 145
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 264 YNINSMPTFVFVKNGKKLDEFSGAN 338
Y++ +P FVF K+GK +D GA+
Sbjct: 70 YSVALVPYFVFFKDGKTVDTLEGAD 94
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 118 KLVVIDFMATWCGPCKMIGPKL 183
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 118 KLVVIDFMATWCGPCKMIGPKL 183
K + + F A WC PCK P+L
Sbjct: 44 KTICLFFSAIWCRPCKDFTPEL 65
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 82 DDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMS 207
DD+K+ + A VI++ A+WCG C I P +++ S
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFS 73
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 267 NINSMPTFVFVKNGKKLDEFSGA 335
+I PTF F ++G+K+DE GA
Sbjct: 91 HIRYTPTFQFYRDGEKVDEMFGA 113
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 27.5 bits (58), Expect = 8.9
Identities = 8/40 (20%), Positives = 23/40 (57%)
Frame = +1
Query: 97 RLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMSDSI 216
+L +++++ + + CGPC+ + P L+++ E + +
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDV 475
>At1g78740.1 68414.m09177 hypothetical protein
Length = 306
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 382 SIYLCLRIVVLSLSTLA-PENSSSFLPFLTKTNVG 281
+IY+C +V L LST+ P S LPFL +G
Sbjct: 94 TIYICESLVSLKLSTVTLPSVKSVSLPFLRVLKLG 128
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,924,027
Number of Sequences: 28952
Number of extensions: 262058
Number of successful extensions: 752
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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