Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0853
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P45428 Cluster: Putative cryptic C4-dicarboxylate trans... 182 6e-45
UniRef50_A1HLW4 Cluster: Anaerobic c4-dicarboxylate antiporter, ... 95 1e-18
UniRef50_Q8D502 Cluster: C4-dicarboxylate transporter; n=3; Vibr... 86 7e-16
UniRef50_Q1Z9X6 Cluster: Putative uncharacterized protein; n=1; ... 84 4e-15
UniRef50_A1W106 Cluster: Cryptic C4-dicarboxylate transporter Dc... 83 5e-15
UniRef50_UPI00005F90F2 Cluster: COG3069: C4-dicarboxylate transp... 79 1e-13
UniRef50_A7GWX1 Cluster: Putative cryptic C4-dicarboxylate trans... 77 3e-13
UniRef50_A0KIB9 Cluster: Transporter, anaerobic C4-dicarboxylate... 76 9e-13
UniRef50_UPI00015C6258 Cluster: hypothetical protein CKO_03718; ... 75 1e-12
UniRef50_Q7MJB8 Cluster: C4-dicarboxylate transporter; n=2; Vibr... 73 9e-12
UniRef50_Q5E5Z0 Cluster: Anaerobic C4-dicarboxylate transporter;... 69 8e-11
UniRef50_A5EX16 Cluster: C4-dicarboxylate anaerobic carrier, Dcu... 69 8e-11
UniRef50_Q1VQI3 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_P0ABP5 Cluster: Anaerobic C4-dicarboxylate transporter ... 63 5e-09
UniRef50_Q5E5F1 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_Q4HDY4 Cluster: C4-dicarboxylate anaerobic carrier, put... 57 4e-07
UniRef50_Q833M4 Cluster: C4-dicarboxylate anaerobic carrier; n=2... 56 6e-07
UniRef50_Q8G3I8 Cluster: C4-dicarboxylate transporter; n=3; Bact... 54 2e-06
UniRef50_Q6NHI8 Cluster: Putative transport protein; n=1; Coryne... 47 4e-04
UniRef50_A4W8N9 Cluster: DoxX family protein; n=6; Bacteria|Rep:... 39 0.10
UniRef50_Q4P9U8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.18
UniRef50_Q7UZ85 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q759F8 Cluster: ADR318Wp; n=1; Eremothecium gossypii|Re... 35 1.6
UniRef50_UPI00015B40DA Cluster: PREDICTED: similar to carboxyles... 35 2.2
UniRef50_A0YC82 Cluster: Flagellar biosynthesis protein; n=1; ma... 34 3.8
UniRef50_Q47ZT2 Cluster: TPR domain protein; n=1; Colwellia psyc... 33 5.0
UniRef50_A7BDQ5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A6PRF6 Cluster: Helix-turn-helix-domain containing prot... 33 5.0
UniRef50_Q851P6 Cluster: Putative uncharacterized protein OSJNBa... 33 5.0
UniRef50_A2E3M0 Cluster: Zinc finger in N-recognin family protei... 33 5.0
UniRef50_Q2S7X9 Cluster: Uncharacterized protein conserved in ba... 33 6.6
UniRef50_Q0G293 Cluster: Thiamin ABC transporter membrane protei... 33 6.6
UniRef50_Q9VZX2 Cluster: CG9973-PA; n=1; Drosophila melanogaster... 33 6.6
UniRef50_Q4WF41 Cluster: PKS-like enzyme, putative; n=5; Eukaryo... 33 6.6
UniRef50_A7QCN5 Cluster: Chromosome chr12 scaffold_78, whole gen... 33 8.7
UniRef50_Q9VBV9 Cluster: CG31103-PA; n=2; Sophophora|Rep: CG3110... 33 8.7
UniRef50_Q4PBB5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_Q3IMC4 Cluster: Putative uncharacterized protein; n=2; ... 33 8.7
UniRef50_O29841 Cluster: Probable RNA 2'-phosphotransferase 1; n... 33 8.7
>UniRef50_P45428 Cluster: Putative cryptic C4-dicarboxylate
transporter dcuD; n=16; Enterobacteriaceae|Rep: Putative
cryptic C4-dicarboxylate transporter dcuD - Escherichia
coli (strain K12)
Length = 455
Score = 182 bits (444), Expect = 6e-45
Identities = 103/145 (71%), Positives = 109/145 (75%)
Frame = +1
Query: 256 GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQ 435
GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQ
Sbjct: 124 GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQ 183
Query: 436 VAGMKIATYFFHYQLPVASCVIISGRSPTFSCKRF*QKR*KYQSRTGRAKSSR*CPAALF 615
VAGMKIATYFFHYQLPVASCVIIS F +R K+ K + + + L+
Sbjct: 184 VAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAEQKALDNVPPLY 243
Query: 616 TPFYL*CR*SWMLGSLFLAHVGLMQ 690
MLGSLFLAHVGLMQ
Sbjct: 244 YAILPVMPLILMLGSLFLAHVGLMQ 268
Score = 150 bits (364), Expect = 3e-35
Identities = 75/75 (100%), Positives = 75/75 (100%)
Frame = +2
Query: 29 LDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPL 208
LDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPL
Sbjct: 48 LDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPL 107
Query: 209 KLIRSPYIILSATYV 253
KLIRSPYIILSATYV
Sbjct: 108 KLIRSPYIILSATYV 122
>UniRef50_A1HLW4 Cluster: Anaerobic c4-dicarboxylate antiporter,
DcuC family; n=2; Bacteria|Rep: Anaerobic
c4-dicarboxylate antiporter, DcuC family - Thermosinus
carboxydivorans Nor1
Length = 456
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = +1
Query: 256 GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQ 435
G ++ I SASGL MLLMVTLFP LVSLGVSRLSA AVIATT+ ++W +T +I +AQ
Sbjct: 123 GMLLGLCINSASGLAMLLMVTLFPVLVSLGVSRLSATAVIATTLCLDWSPSDTGTILSAQ 182
Query: 436 VAGMKIATYFFHYQLPVASCVI 501
AG+ Y+ +YQ+P+A V+
Sbjct: 183 TAGLDPVLYWTNYQIPIALTVM 204
Score = 80.6 bits (190), Expect = 3e-14
Identities = 38/74 (51%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = +2
Query: 35 PTKSS-GYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLK 211
P K+S G + D + I + S+R AGLGL+IMAVGG+ARYM+ IGAS+A+V L RPL
Sbjct: 48 PAKNSTGSVFFDAFEFIKQTFSSRAAGLGLNIMAVGGFARYMDHIGASKALVRLTIRPLL 107
Query: 212 LIRSPYIILSATYV 253
+R+PY++++A++V
Sbjct: 108 ALRAPYLVMAASWV 121
>UniRef50_Q8D502 Cluster: C4-dicarboxylate transporter; n=3;
Vibrionaceae|Rep: C4-dicarboxylate transporter - Vibrio
vulnificus
Length = 488
Score = 86.2 bits (204), Expect = 7e-16
Identities = 45/104 (43%), Positives = 68/104 (65%)
Frame = +1
Query: 196 KPPVKTHSLAVYYSVGNLRHGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVI 375
KP +K +S + ++ + GQ ++ FI+SA+GL +LLM TL+P L+ LG S+ AV+
Sbjct: 102 KPLMKLNSPYLMLALAFIL-GQALSLFISSATGLALLLMATLYPVLIRLGCSKAGVAAVL 160
Query: 376 ATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIIS 507
A+T +IE+G NSI AAQ AGM I +F QLP+ + +II+
Sbjct: 161 ASTCAIEFGPASGNSILAAQTAGMDITAFFVGEQLPIVTVLIIA 204
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/75 (38%), Positives = 52/75 (69%)
Frame = +2
Query: 41 KSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIR 220
KS+G++ DI+ I ++ S + GLGL+IM +GG+A +M IGAS+ MV + ++PL +
Sbjct: 49 KSTGWVGFDIFEYISQVFSKQSGGLGLNIMLIGGFALFMSAIGASQVMVKVAAKPLMKLN 108
Query: 221 SPYIILSATYVTAKS 265
SPY++L+ ++ ++
Sbjct: 109 SPYLMLALAFILGQA 123
>UniRef50_Q1Z9X6 Cluster: Putative uncharacterized protein; n=1;
Photobacterium profundum 3TCK|Rep: Putative
uncharacterized protein - Photobacterium profundum 3TCK
Length = 462
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/83 (48%), Positives = 60/83 (72%)
Frame = +1
Query: 256 GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQ 435
G+ ++ FITSASGLG+LLMVTL+P + S+G+SRLSA A IAT +++E G + N FAA+
Sbjct: 125 GEFLSIFITSASGLGVLLMVTLYPLMRSVGLSRLSACAPIATAVAVEMGPGQGNVNFAAE 184
Query: 436 VAGMKIATYFFHYQLPVASCVII 504
+ G+ + Y YQ+ VA+ ++
Sbjct: 185 IIGIDVVDYVVQYQMVVATAALL 207
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 LDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPL 208
L + S+G +D++ I S++ AGLGL IMA+ G+A YM IGAS A+V +L+RPL
Sbjct: 48 LPESASTGSQWLDVFQFIKNTFSSQSAGLGLKIMAIAGFAFYMHEIGASEALVRVLTRPL 107
Query: 209 KLIR-SPYIILSATYV 253
I+ PY+ ++ +V
Sbjct: 108 ARIKHMPYLFMAMCFV 123
>UniRef50_A1W106 Cluster: Cryptic C4-dicarboxylate transporter DcuD,
authentic frameshift; n=11; Campylobacter|Rep: Cryptic
C4-dicarboxylate transporter DcuD, authentic frameshift
- Campylobacter jejuni subsp. jejuni serotype O:23/36
(strain 81-176)
Length = 479
Score = 83.4 bits (197), Expect = 5e-15
Identities = 44/98 (44%), Positives = 62/98 (63%)
Frame = +1
Query: 259 QIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQV 438
Q++ FI S +GL +LLMVT++P LV GVS+LSA++VIA I+ G N I A++V
Sbjct: 125 QLLVLFIPSHAGLALLLMVTMYPILVRSGVSKLSALSVIAICQYIDHGPGSGNVIMASKV 184
Query: 439 AGMKIATYFFHYQLPVASCVIISGRSPTFSCKRF*QKR 552
A + A YFFHYQLP +II+ + C +F K+
Sbjct: 185 AEVDPAIYFFHYQLPTTLPIIIAVGIAIYLCNKFFDKK 222
Score = 64.1 bits (149), Expect = 3e-09
Identities = 24/62 (38%), Positives = 43/62 (69%)
Frame = +2
Query: 65 DIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSA 244
DI+ + +S+ +AGLGL++M + G++ YM+ +GAS A+ + +PLK ++SPY++L
Sbjct: 60 DIFQVFNQTMSSTLAGLGLTLMTIAGFSAYMDHVGASYALFKVFEKPLKAVKSPYVLLIV 119
Query: 245 TY 250
Y
Sbjct: 120 AY 121
>UniRef50_UPI00005F90F2 Cluster: COG3069: C4-dicarboxylate
transporter; n=1; Yersinia frederiksenii ATCC 33641|Rep:
COG3069: C4-dicarboxylate transporter - Yersinia
frederiksenii ATCC 33641
Length = 456
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/77 (48%), Positives = 54/77 (70%)
Frame = +2
Query: 32 DPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLK 211
D KS+G + +DI+ LS ++AG+GL IMA GG+A YM+ I AS AMV+ RPL+
Sbjct: 51 DKAKSTGSVWIDIFAFAKNSLSTQVAGIGLIIMAAGGFASYMDHIKASNAMVNACIRPLQ 110
Query: 212 LIRSPYIILSATYVTAK 262
LI++PY+IL+ Y+ A+
Sbjct: 111 LIKAPYLILAIGYICAQ 127
Score = 72.5 bits (170), Expect = 9e-12
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = +1
Query: 259 QIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQV 438
Q++ I+SA+GL MLL+VT FP LV LGVS+ +A ++I ++ G + AA+
Sbjct: 127 QLLHVAISSAAGLAMLLLVTFFPVLVRLGVSKAAAASMIGLCAFMDLGPAVGTANLAAKH 186
Query: 439 AGMKIATYFFHYQLPVASCVII 504
AGM+ A YF HYQ+P+A V++
Sbjct: 187 AGMETAIYFVHYQMPIAIAVML 208
>UniRef50_A7GWX1 Cluster: Putative cryptic C4-dicarboxylate
transporter DcuD; n=3; Campylobacter|Rep: Putative
cryptic C4-dicarboxylate transporter DcuD -
Campylobacter curvus 525.92
Length = 458
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/98 (41%), Positives = 61/98 (62%)
Frame = +1
Query: 259 QIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQV 438
Q++ FI S +GL +LLMVTL+P LV GVS+LSA++VI I+ G N I+A++V
Sbjct: 125 QVIVIFIPSHAGLALLLMVTLYPILVRTGVSKLSALSVIGACQFIDHGPGSGNVIYASKV 184
Query: 439 AGMKIATYFFHYQLPVASCVIISGRSPTFSCKRF*QKR 552
AG+ A YF HYQL +II+ + +++ K+
Sbjct: 185 AGIDPAAYFVHYQLSTTIPIIIAVAVTIYFSQKYFDKK 222
Score = 68.5 bits (160), Expect = 1e-10
Identities = 26/74 (35%), Positives = 50/74 (67%)
Frame = +2
Query: 29 LDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPL 208
+DP KS D++ + + +S+ +AGLGL++M + G++ YM+ +GAS ++ + +PL
Sbjct: 48 IDPKKSLNLTFFDLFEVVNQKMSSTLAGLGLTLMCIAGFSAYMDHVGASYSLFKVFEKPL 107
Query: 209 KLIRSPYIILSATY 250
+ + +PYI+L A+Y
Sbjct: 108 QKVTNPYILLVASY 121
>UniRef50_A0KIB9 Cluster: Transporter, anaerobic C4-dicarboxylate
uptake C (DcuC) family; n=1; Aeromonas hydrophila subsp.
hydrophila ATCC 7966|Rep: Transporter, anaerobic
C4-dicarboxylate uptake C (DcuC) family - Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240)
Length = 458
Score = 75.8 bits (178), Expect = 9e-13
Identities = 35/69 (50%), Positives = 51/69 (73%)
Frame = +1
Query: 274 FITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKI 453
F+TSA+GLG+LLMVT++P + +LG+S SA VIAT+ + E G +TN+IF+A +GM
Sbjct: 129 FVTSATGLGLLLMVTMYPVMRNLGISPASACGVIATSQAFEIGPTQTNAIFSAGQSGMDP 188
Query: 454 ATYFFHYQL 480
+YF YQ+
Sbjct: 189 TSYFVDYQI 197
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +2
Query: 29 LDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPL 208
L KS+G+ + D++ + S R AGLGL+IMAV G+A YM IGAS+A+V + +P+
Sbjct: 47 LPADKSTGFALFDLFEVFKGIFSYRAAGLGLTIMAVAGFATYMSHIGASQALVRVAVKPV 106
Query: 209 KLIRSPYIILSATYVTA 259
I+S Y++L+ Y+ A
Sbjct: 107 AGIQSSYLMLAICYLVA 123
>UniRef50_UPI00015C6258 Cluster: hypothetical protein CKO_03718;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_03718 - Citrobacter koseri ATCC BAA-895
Length = 471
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = +2
Query: 41 KSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIR 220
KS+G +DI++ L+ +IAG+GL IMA GG+A YM+ I AS AMV++ RPL++I+
Sbjct: 70 KSTGSTWLDIFSFAKESLTTQIAGIGLIIMAAGGFASYMDHIKASNAMVNMCIRPLQVIK 129
Query: 221 SPYIILSATYVTAK 262
+PY+IL+ Y+ A+
Sbjct: 130 APYLILALGYICAQ 143
Score = 74.9 bits (176), Expect = 2e-12
Identities = 41/98 (41%), Positives = 60/98 (61%)
Frame = +1
Query: 259 QIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQV 438
Q++ I+SA+GL MLL+VT FP LV LGVS+ SA A+I ++ G + AA+
Sbjct: 143 QLLHVAISSAAGLAMLLLVTFFPVLVRLGVSKASAAAMIGLCAFMDLGPAVGTANLAAKH 202
Query: 439 AGMKIATYFFHYQLPVASCVIISGRSPTFSCKRF*QKR 552
AGM+ A YF HYQ+PVA V+++ F ++ K+
Sbjct: 203 AGMESAIYFAHYQMPVAVVVMLAVAVVIFFTAKYFDKK 240
>UniRef50_Q7MJB8 Cluster: C4-dicarboxylate transporter; n=2;
Vibrionaceae|Rep: C4-dicarboxylate transporter - Vibrio
vulnificus (strain YJ016)
Length = 456
Score = 72.5 bits (170), Expect = 9e-12
Identities = 33/82 (40%), Positives = 55/82 (67%)
Frame = +2
Query: 41 KSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIR 220
K+SG +VD + I + S+ +A LGL IMAVGG+++YM IGA+ A+V + ++PL +I
Sbjct: 55 KTSGATVVDFFLVIQSISSSTLAKLGLIIMAVGGFSKYMGHIGAANALVKVTTKPLSVIS 114
Query: 221 SPYIILSATYVTAKSWRSLLPA 286
+PY+IL+ Y+ + +P+
Sbjct: 115 NPYVILALAYLLGQFLNVFIPS 136
Score = 70.5 bits (165), Expect = 4e-11
Identities = 40/99 (40%), Positives = 57/99 (57%)
Frame = +1
Query: 256 GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQ 435
GQ + FI SA GL MLL+V L+P LVS+G + S AV+ATT ++ G S AA+
Sbjct: 127 GQFLNVFIPSAVGLAMLLLVALYPVLVSIGCTPASVAAVLATTACLDLGPASGASNKAAE 186
Query: 436 VAGMKIATYFFHYQLPVASCVIISGRSPTFSCKRF*QKR 552
V G+ A+YF +QL V C + + F +++ KR
Sbjct: 187 VIGIDAASYFVEHQLFVGVCTALVIATLHFVAQKWFDKR 225
>UniRef50_Q5E5Z0 Cluster: Anaerobic C4-dicarboxylate transporter;
n=1; Vibrio fischeri ES114|Rep: Anaerobic
C4-dicarboxylate transporter - Vibrio fischeri (strain
ATCC 700601 / ES114)
Length = 455
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/83 (43%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Frame = +1
Query: 262 IMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVA 441
I+ I SA+GLG+LLM TL+P ++ LG+SR SA AVIA+++++ + ++I A++
Sbjct: 127 ILQLAIPSATGLGVLLMGTLYPVMLGLGISRGSAAAVIASSLAVSFTPTGVDAIRASEAL 186
Query: 442 GMKIATYFFHYQLP--VASCVII 504
GM + +Y HYQ P VA+ V+I
Sbjct: 187 GMDLMSYVSHYQAPTSVATMVVI 209
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +2
Query: 89 MLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVTAKSW 268
++ R LGL IMA+ G+A YM IGA+ +V L ++PL I++ I+L Y A
Sbjct: 69 LMGYRAGALGLMIMALVGFADYMSHIGANDVVVRLATKPLSRIQNKNIMLFFAYCMASIL 128
Query: 269 RSLLPA 286
+ +P+
Sbjct: 129 QLAIPS 134
>UniRef50_A5EX16 Cluster: C4-dicarboxylate anaerobic carrier, DcuC
family protein; n=2; Dichelobacter nodosus VCS1703A|Rep:
C4-dicarboxylate anaerobic carrier, DcuC family protein
- Dichelobacter nodosus (strain VCS1703A)
Length = 468
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +2
Query: 41 KSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIR 220
+SSG DI N I + SNR +GLGL IM + G++ YM +GA+ ++ LLS+PLK I+
Sbjct: 54 ESSGLFFHDISNYIYGLFSNRGSGLGLIIMTLVGFSAYMTHVGANGVVIYLLSKPLKHIK 113
Query: 221 SPYIILSATYV 253
SPY++L +++
Sbjct: 114 SPYVLLIGSFI 124
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/105 (29%), Positives = 55/105 (52%)
Frame = +1
Query: 190 LVKPPVKTHSLAVYYSVGNLRHGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVA 369
L+ P+K +G+ G +M+ I SA+ LG+ LM T FP L +G++ SA A
Sbjct: 104 LLSKPLKHIKSPYVLLIGSFILGSLMSFAINSATALGVFLMATFFPVLTRIGITAPSAAA 163
Query: 370 VIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVII 504
+ ATT+ + + + + AA+ + M + Y F +P++ +I
Sbjct: 164 ICATTVVVNFSPTSADVVLAAEKSSMALLPYTFGVMIPMSVIALI 208
>UniRef50_Q1VQI3 Cluster: Putative uncharacterized protein; n=2;
Flavobacteriales|Rep: Putative uncharacterized protein -
Psychroflexus torquis ATCC 700755
Length = 453
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = +1
Query: 256 GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQ 435
GQI+ I SA+GL +LLM +LFP LV+LGVSRLSAV+VI T + G ++ A+
Sbjct: 126 GQILFVSIPSAAGLSLLLMASLFPILVNLGVSRLSAVSVITATTAFGMGPASAITVSASA 185
Query: 436 VAGMKIATYFFHYQLPVASCVIIS 507
+ + I Y YQ+P+ + IS
Sbjct: 186 LCDIPIIDYLVDYQIPLVWPLSIS 209
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 41 KSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLI- 217
+ +G++ D + I S AG+GL IMA+GG+ Y+++IGAS+A+V + +PLKL
Sbjct: 53 EETGFIGFDFFRYIKESFSKTNAGVGLMIMAIGGFVAYIDKIGASKALVHVAMKPLKLFK 112
Query: 218 RSPYIILS 241
+ PYI S
Sbjct: 113 KKPYIAAS 120
>UniRef50_P0ABP5 Cluster: Anaerobic C4-dicarboxylate transporter
dcuC; n=74; Gammaproteobacteria|Rep: Anaerobic
C4-dicarboxylate transporter dcuC - Shigella flexneri
Length = 461
Score = 63.3 bits (147), Expect = 5e-09
Identities = 33/97 (34%), Positives = 57/97 (58%)
Frame = +1
Query: 262 IMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVA 441
+M+ ++SA+GLG+LLM TLFP +V++G+SR +A A+ A+ +I + + AAQ +
Sbjct: 129 LMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVLAAQAS 188
Query: 442 GMKIATYFFHYQLPVASCVIISGRSPTFSCKRF*QKR 552
M + + F LP++ II F +R+ K+
Sbjct: 189 EMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKK 225
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/72 (41%), Positives = 44/72 (61%)
Frame = +2
Query: 44 SSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRS 223
S+GY DI + +L +R LG+ IM + G+A YM IGA+ +V L S+PL+ I S
Sbjct: 56 STGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINS 115
Query: 224 PYIILSATYVTA 259
PY+++ A Y A
Sbjct: 116 PYLLMIAAYFVA 127
>UniRef50_Q5E5F1 Cluster: Putative uncharacterized protein; n=2;
Vibrionaceae|Rep: Putative uncharacterized protein -
Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 429
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/111 (33%), Positives = 61/111 (54%)
Frame = +1
Query: 220 LAVYYSVGNLRHGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEW 399
LA++Y +G ++ ITSAS L M+ M T+FP L+S G+S+ A +IA+ IE+
Sbjct: 100 LAMFYLIG-----LALSTVITSASALSMIYMSTVFPILISKGISKEGAAGMIASVGVIEF 154
Query: 400 GILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISGRSPTFSCKRF*QKR 552
G L++++IF A+ I Y + QL + + I G + +R+ R
Sbjct: 155 GHLKSSTIFMAEEQNRLINDYVINGQLFLFIGIAIVGAISHYFWQRYLDNR 205
Score = 39.1 bits (87), Expect = 0.10
Identities = 16/54 (29%), Positives = 35/54 (64%)
Frame = +2
Query: 92 LSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYV 253
LS+ +GL+I+ + ++ Y+ + GA++ +V L+ +P+ I+ Y+IL+ Y+
Sbjct: 52 LSSVFLSIGLNIVVIIAFSEYVNKNGATKDLVLLVYKPISKIKDRYLILAMFYL 105
>UniRef50_Q4HDY4 Cluster: C4-dicarboxylate anaerobic carrier,
putative; n=13; Campylobacter|Rep: C4-dicarboxylate
anaerobic carrier, putative - Campylobacter coli RM2228
Length = 507
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/75 (33%), Positives = 48/75 (64%)
Frame = +2
Query: 56 LIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYII 235
+++D Y I ++++G+GL IM+V G+A YM+ I AS + L ++PL I++ Y+I
Sbjct: 63 VLLDSYAFITATFKSQLSGVGLIIMSVAGFAAYMKHINASAKLAFLANKPLGKIKNKYLI 122
Query: 236 LSATYVTAKSWRSLL 280
LS T++ + + ++
Sbjct: 123 LSGTFIVGMALKIVI 137
>UniRef50_Q833M4 Cluster: C4-dicarboxylate anaerobic carrier; n=2;
Firmicutes|Rep: C4-dicarboxylate anaerobic carrier -
Enterococcus faecalis (Streptococcus faecalis)
Length = 457
Score = 56.4 bits (130), Expect = 6e-07
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 190 LVKPPVKTHSLAVYYSVGNLRHGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVA 369
LVKP +K +++ V L G +M+ + SAS L ++LM L+P L S+G+S L+A
Sbjct: 102 LVKPLMKIKRKSLFVPVVFLI-GNLMSLVVPSASSLAIILMSILYPMLASMGISSLTAAG 160
Query: 370 VIATTMSIEWGILETNSIFAAQVAGMKIATY-FFHYQLPVASCVIIS 507
VIA T +I L +++ AA G + Y ++ ++ + S +II+
Sbjct: 161 VIAMTATIMPTPLGADNVIAANTLGYDVLNYVVWNAKISLPSLLIIA 207
Score = 41.5 bits (93), Expect = 0.019
Identities = 19/82 (23%), Positives = 44/82 (53%)
Frame = +2
Query: 41 KSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIR 220
+ +G+ + DI+ + + +++ G+ IM + GY+ YM IGA++ V+ L +PL I+
Sbjct: 51 EGTGFGLFDIFLKFKDTIIAQVSSAGIVIMILFGYSGYMNAIGANQMAVNFLVKPLMKIK 110
Query: 221 SPYIILSATYVTAKSWRSLLPA 286
+ + ++ ++P+
Sbjct: 111 RKSLFVPVVFLIGNLMSLVVPS 132
>UniRef50_Q8G3I8 Cluster: C4-dicarboxylate transporter; n=3;
Bacteria|Rep: C4-dicarboxylate transporter -
Bifidobacterium longum
Length = 476
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/81 (30%), Positives = 45/81 (55%)
Frame = +2
Query: 44 SSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRS 223
SSG +D + + + + G I+ +GGY YM IGA+ VS+L++P+ I+S
Sbjct: 56 SSGVTWLDPFKVVGDQFVSTLTSAGFIILILGGYTGYMSHIGANEVTVSVLAKPIAHIKS 115
Query: 224 PYIILSATYVTAKSWRSLLPA 286
PYI++ T++ ++P+
Sbjct: 116 PYILVPITFLLGNLLSLVIPS 136
Score = 52.0 bits (119), Expect = 1e-05
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Frame = +1
Query: 256 GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSI-FAA 432
G +++ I SAS L ++LM TL+P L G+S LSA AVIATT +I L ++++ AA
Sbjct: 127 GNLLSLVIPSASNLAIILMATLYPVLRQAGMSLLSAAAVIATTATIMPTPLGSDNVAIAA 186
Query: 433 QVA------GMKIATYFFHYQLPVASCVIISGRSPTFSCKRF*QKR 552
++A G+ + Y F Y + V+ ++ + ++F KR
Sbjct: 187 ELAKTDMFSGLTASDYVFRYHVLVSIPTLLVMALAHYFWQKFMDKR 232
>UniRef50_Q6NHI8 Cluster: Putative transport protein; n=1;
Corynebacterium diphtheriae|Rep: Putative transport
protein - Corynebacterium diphtheriae
Length = 470
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +2
Query: 41 KSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIR 220
K SG D I + +R +G+G++IM + G+ YM IGA V LLS PL+ +R
Sbjct: 52 KPSGNSFYDELLVIEALFKSRFSGIGMAIMVLFGFVSYMRTIGADAKAVVLLSAPLQKMR 111
Query: 221 SPYIILSATYVTAKSWRSLLPA 286
Y ++ + + ++P+
Sbjct: 112 GSYWMVPIGFTIGTALSLIVPS 133
>UniRef50_A4W8N9 Cluster: DoxX family protein; n=6; Bacteria|Rep:
DoxX family protein - Enterobacter sp. 638
Length = 144
Score = 39.1 bits (87), Expect = 0.10
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 256 GQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQ 435
G ++A+ + G+L+ + P L+ LG+ A V+A TM + W ++ T FA
Sbjct: 48 GMLVAKGLPGFIAYGVLIGEVVAPVLIVLGILTRPAALVLAFTMIVAWLMVGTGKTFALD 107
Query: 436 VAG---MKIATYFFHYQLPVA 489
G ++ YFF L VA
Sbjct: 108 AVGAWAIESLVYFFIGALAVA 128
>UniRef50_Q4P9U8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 619
Score = 38.3 bits (85), Expect = 0.18
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 229 YYSVGNLRHGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRL-SAVAVIA--TTMSIEW 399
++ VG + +Q I A GLG++ +TL P +L SRL SA A A T W
Sbjct: 435 HWHVGTSKFEWAFSQVILGA-GLGIMFPITLPPIQAALPASRLESATAAYAFTRTFGAVW 493
Query: 400 GILETNSIFAAQVA 441
GI +IF+ Q A
Sbjct: 494 GITAATTIFSTQAA 507
>UniRef50_Q7UZ85 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 297
Score = 35.5 bits (78), Expect = 1.2
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +1
Query: 169 GQSRDGELVKPPVKTHSLAVYYSVG--NLRHGQIMAQFITSASGLGMLLMVTLFPTLVSL 342
GQS + L++PP+K H LA ++G L + + + +AS LL T
Sbjct: 201 GQSWENALLRPPIKDHPLAAVIAIGQSQLSREETIHMWHRAASDSHWLLQ-----TRSQR 255
Query: 343 GVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKIATYFF 468
V L V +I + + IL TN+ + G+ ++F
Sbjct: 256 TVRHLFRVGLIGSLFTAGLAILATNTNIVLMIEGLTFTGWWF 297
>UniRef50_Q759F8 Cluster: ADR318Wp; n=1; Eremothecium gossypii|Rep:
ADR318Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 350
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 551 LFCQKRLHEKVGDRPEIMTQEATGSW*WKKYVAIFIPATWAAKMEF-VSRIP 399
L C++ + + GDR E + + TG+W W Y+ P + F +R+P
Sbjct: 77 LLCREGIAQTAGDRSESIEERMTGAWYWAYYMEFVYPLVILQSLSFEQNRLP 128
>UniRef50_UPI00015B40DA Cluster: PREDICTED: similar to
carboxylesterase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to carboxylesterase - Nasonia
vitripennis
Length = 542
Score = 34.7 bits (76), Expect = 2.2
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +3
Query: 270 AVYYQRLRSGYVADGHLISDAGESGSKSSLCGGSYRNHDVH*VGDSGNELHFCCPGSGNE 449
+V Y+ G++ GH ++ AG G + +CG ++ ++ G N + SG+
Sbjct: 137 SVNYRLGPMGFLNLGHEVA-AGNQGLRDIICGLNWVQRNIEQFGGDPNNVTIFGNSSGSM 195
Query: 450 NCHILLPLP-ASGRLLRHYLGAISHFFVQALLTKK 551
CH+ LP G + L + S F + L T K
Sbjct: 196 TCHLFTLLPTVKGLFHKAILQSGSIFSTRNLFTGK 230
>UniRef50_A0YC82 Cluster: Flagellar biosynthesis protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Flagellar
biosynthesis protein - marine gamma proteobacterium
HTCC2143
Length = 515
Score = 33.9 bits (74), Expect = 3.8
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 8 KLIDTVDLDPTKSSGYLIVDIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASR 178
+L+D D+DPTKSS I DI+ ++ L+ R+ +G ++ GG ++ GA +
Sbjct: 250 ELLDCGDVDPTKSSRGSI-DIWQTVMTDLTARLPIVGSDMVGSGGVFAFVGPTGAGK 305
>UniRef50_Q47ZT2 Cluster: TPR domain protein; n=1; Colwellia
psychrerythraea 34H|Rep: TPR domain protein - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 778
Score = 33.5 bits (73), Expect = 5.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -2
Query: 480 KLVVEEVCGNFHS--RYLGSKNGVRFQNPPLNGHRGCDNCHRRETTYSQTHQRRK*GDHQ 307
KL +E +C H Y +++ ++P + C NCH ETTY + RR DH
Sbjct: 360 KLPIETLCLQCHQSDNYASTQH---HKHPESSTGAQCVNCHMPETTYMEIDARR---DHG 413
Query: 306 QHTQTGGAGNKL 271
H T KL
Sbjct: 414 FHIPTPNLAQKL 425
>UniRef50_A7BDQ5 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 380
Score = 33.5 bits (73), Expect = 5.0
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +1
Query: 79 NPAHAVQPHCRIGAVDYGGGRLCPLHGAHRGQSRDGELVKPPVKTHSLAVYYSVGNLRHG 258
NPA A++ +D G H R + EL PP H V+ G R+G
Sbjct: 306 NPAQAIRLTANSAGIDLKGSAA---HSTARFTAFGAELYVPPAYLHRYLVWD--GTSRYG 360
Query: 259 QIMAQFITSASGLG 300
A ++TSA+ +G
Sbjct: 361 SSRANYLTSAANVG 374
>UniRef50_A6PRF6 Cluster: Helix-turn-helix-domain containing
protein, AraC type; n=1; Victivallis vadensis ATCC
BAA-548|Rep: Helix-turn-helix-domain containing protein,
AraC type - Victivallis vadensis ATCC BAA-548
Length = 256
Score = 33.5 bits (73), Expect = 5.0
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 337 SLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHYQLPVASCVIISGRS 516
+L RL A++A +E I T I A A ++ TY FH +L + +G S
Sbjct: 113 ALDQCRLLLPALLARITRLEGSIDGTAEIPAGLAAAIRFITYHFHRELAIREIAASNGMS 172
Query: 517 PTF 525
P++
Sbjct: 173 PSY 175
>UniRef50_Q851P6 Cluster: Putative uncharacterized protein
OSJNBa0052F07.27; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0052F07.27 - Oryza sativa subsp. japonica (Rice)
Length = 193
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = -3
Query: 452 IFIPATWAAKMEFVSRIPHSMDIVVAITATAERRLTPRLTSVGNKVTISN 303
I+IP ++E++ ++ SMD++V ++ ++RR + R + K ISN
Sbjct: 22 IYIPGLDWTRLEYMYKLHESMDVIVGDSSRSDRRASGRTAADRQKQPISN 71
>UniRef50_A2E3M0 Cluster: Zinc finger in N-recognin family protein;
n=1; Trichomonas vaginalis G3|Rep: Zinc finger in
N-recognin family protein - Trichomonas vaginalis G3
Length = 252
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 381 HDVH*VGDSGNELHFCCPGSGNENCHILLPLPASG 485
H H VG GN++ +C G G NCH L P G
Sbjct: 50 HVNHDVGFIGNKIGYCWCGYGCRNCHCFLEHPVDG 84
>UniRef50_Q2S7X9 Cluster: Uncharacterized protein conserved in
bacteria; n=20; Proteobacteria|Rep: Uncharacterized
protein conserved in bacteria - Hahella chejuensis
(strain KCTC 2396)
Length = 287
Score = 33.1 bits (72), Expect = 6.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 420 HFCCPGSGNENCHILLPLPASGRLLRHYLGAISHFFVQALLTKKIKI 560
H C G N H LLPLP + +RH + VQA L ++I +
Sbjct: 97 HLCWTGLSAHNSHDLLPLPYNAESVRHVAERVKQ--VQAFLGRRIAL 141
>UniRef50_Q0G293 Cluster: Thiamin ABC transporter membrane protein;
n=1; Fulvimarina pelagi HTCC2506|Rep: Thiamin ABC
transporter membrane protein - Fulvimarina pelagi
HTCC2506
Length = 539
Score = 33.1 bits (72), Expect = 6.6
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +2
Query: 26 DLDPTKSSGYLIVDI-YNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASR----AMVS 190
+ DP ++ ++ I I+ ++NR+ G +GG A +R G R A+V
Sbjct: 233 EFDPGRAVALSLLQIGLTAIILTVANRLGGSDAGQFGLGGRATRWDRAGPIRRGYDAVVL 292
Query: 191 LLSRPLKLIRSPYIILSATYVTAKSWRSLLPA 286
+L L + SP++ + +TA WR L A
Sbjct: 293 ILG--LFFVLSPFVAIVLAGITADLWRLLSEA 322
>UniRef50_Q9VZX2 Cluster: CG9973-PA; n=1; Drosophila
melanogaster|Rep: CG9973-PA - Drosophila melanogaster
(Fruit fly)
Length = 753
Score = 33.1 bits (72), Expect = 6.6
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 464 SSTTSFRSPLASLSRGDLPLFRASAFDKKDKNINHEQAEQKALDNVPPLYL 616
SST +F+SPL++L GD AS DK+D H N PP+ L
Sbjct: 562 SSTANFKSPLSALGMGDSNDANASGCDKQDYGRRHHLPPPTL--NHPPMTL 610
>UniRef50_Q4WF41 Cluster: PKS-like enzyme, putative; n=5;
Eukaryota|Rep: PKS-like enzyme, putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 808
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -2
Query: 687 HQPDVGEEQRAEHPGLTASQVKWRK*SGGTLSRAFCSACS*LIFLSFL 544
++P +G ++ AE+PG+ ++ K + G S FC+ C L + F+
Sbjct: 732 YEPMLGRDEEAEYPGMAQARRKEQFNCGAGHSTYFCALCFILFLIGFI 779
>UniRef50_A7QCN5 Cluster: Chromosome chr12 scaffold_78, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_78, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 274
Score = 32.7 bits (71), Expect = 8.7
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -2
Query: 531 ARKSGRSPRDNDARGDRKLVVEEVCGNFHSRYLGSKNGVRFQNPPLNGHRGCDNCHRRET 352
A+++ P D RGD + + GN+ + G G + P +G+ H
Sbjct: 183 AQRNYAPPDQRDVRGDNRNYNPQHSGNY-GQGTGGSYGQGMGSGP-SGYGQAQQGHGEGQ 240
Query: 351 TYSQTHQRRK*GDHQQHTQTGGAGNKLRH 265
+SQ QR D Q++ G N++RH
Sbjct: 241 RFSQVDQRNDMQDEQRNYPPTGNTNQVRH 269
>UniRef50_Q9VBV9 Cluster: CG31103-PA; n=2; Sophophora|Rep:
CG31103-PA - Drosophila melanogaster (Fruit fly)
Length = 360
Score = 32.7 bits (71), Expect = 8.7
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 301 MLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIFAAQVAGMKIATYFFHY 474
+LL+V+ T+ S+ + ++ VIA+ E E + AA V G+ ++TY + Y
Sbjct: 32 VLLLVSGLLTITSVAAQQAMSIIVIASQCEFETTQAEKGVMMAASVTGIFLSTYIWGY 89
>UniRef50_Q4PBB5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 761
Score = 32.7 bits (71), Expect = 8.7
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 232 YSVGNLRHGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRL-SAVAVIATTMSIE--WG 402
+ G I+AQ + G+G+L +TL P SL + L +A A A S WG
Sbjct: 480 FQTGTSEWELIVAQVVAGV-GVGILFAITLPPIQASLPIQELETATATYAFCRSFGAIWG 538
Query: 403 ILETNSIFAAQVA 441
I T S+ A V+
Sbjct: 539 IAITTSLLTADVS 551
>UniRef50_Q3IMC4 Cluster: Putative uncharacterized protein; n=2;
Natronomonas pharaonis DSM 2160|Rep: Putative
uncharacterized protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 167
Score = 32.7 bits (71), Expect = 8.7
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 217 SLAVYYSVGNLRHGQIMAQFITSASGLGMLLMVTLFPTLVSL--GVSRLSAVAVIAT-TM 387
+LA Y+ G + + FITS LG L+ LFP L L G+S+++ VA +A
Sbjct: 22 ALAERYTPGQVAGSFAVGVFITSLPTLGTGLL--LFPPLSYLFAGISKVALVAAVAVMNP 79
Query: 388 SIEWGILETNSIFAAQVAG 444
++WG+ + +++ G
Sbjct: 80 VVKWGVYGVSFWLGSRLLG 98
>UniRef50_O29841 Cluster: Probable RNA 2'-phosphotransferase 1; n=2;
Euryarchaeota|Rep: Probable RNA 2'-phosphotransferase 1
- Archaeoglobus fulgidus
Length = 216
Score = 32.7 bits (71), Expect = 8.7
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 139 RLCPLHGAHRGQ----SRDGELVKPPVKTHSLAVYYSVGNLRH 255
R CP HG +RG+ +GEL+ P K L + S G LRH
Sbjct: 5 RFCPEHGFYRGEKCRCGAEGELILPKEKVEKLGKFIS-GVLRH 46
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,926,316
Number of Sequences: 1657284
Number of extensions: 18026114
Number of successful extensions: 54079
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 51523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54057
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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