Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0853
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50632| Best HMM Match : ShTK (HMM E-Value=0.0091) 33 0.29
SB_39346| Best HMM Match : Drf_FH1 (HMM E-Value=0.027) 31 0.67
SB_20697| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 30 1.5
SB_51888| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_51705| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_50119| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_43838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_37253| Best HMM Match : Atrophin-1 (HMM E-Value=0.68) 30 2.0
SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_34139| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_33062| Best HMM Match : DUF485 (HMM E-Value=7.5) 30 2.0
SB_24999| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34) 30 2.0
SB_967| Best HMM Match : Calx-beta (HMM E-Value=2.8) 30 2.0
SB_57935| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_56108| Best HMM Match : Kelch_2 (HMM E-Value=3.7) 30 2.0
SB_54293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_50082| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_46902| Best HMM Match : GYR (HMM E-Value=1.1) 30 2.0
SB_44853| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_39698| Best HMM Match : Rho_RNA_bind (HMM E-Value=3.4) 30 2.0
SB_26734| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_26387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_26286| Best HMM Match : DUF963 (HMM E-Value=0.82) 30 2.0
SB_25779| Best HMM Match : DUF485 (HMM E-Value=5.1) 30 2.0
SB_2527| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_20893| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-23) 29 2.7
SB_31955| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_9061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_40844| Best HMM Match : DUF595 (HMM E-Value=6.1) 29 4.7
SB_34032| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-22) 28 6.2
SB_11263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_4480| Best HMM Match : TAT_ubiq (HMM E-Value=8.2) 28 6.2
SB_961| Best HMM Match : CUB (HMM E-Value=3.4e-08) 28 6.2
SB_51483| Best HMM Match : CAT (HMM E-Value=7.9e-08) 28 6.2
SB_45109| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_38057| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_59325| Best HMM Match : zf-CCHC (HMM E-Value=7.2) 28 8.2
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 8.2
SB_50679| Best HMM Match : Tombus_P19 (HMM E-Value=2.1) 28 8.2
SB_49689| Best HMM Match : fn3 (HMM E-Value=5.9) 28 8.2
SB_49234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_48128| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_47286| Best HMM Match : DUF485 (HMM E-Value=5.5) 28 8.2
SB_45357| Best HMM Match : Sigma_1s (HMM E-Value=5.6) 28 8.2
SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_33473| Best HMM Match : GST_N (HMM E-Value=0.028) 28 8.2
SB_25292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_21775| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_9745| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_8585| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_5820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_56836| Best HMM Match : GAF (HMM E-Value=2.8e-07) 28 8.2
SB_56708| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_52067| Best HMM Match : Pkinase_C (HMM E-Value=6.9) 28 8.2
SB_40896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_40752| Best HMM Match : Ribosomal_L15e (HMM E-Value=2.5) 28 8.2
SB_39500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_35314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015) 28 8.2
SB_12437| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_7597| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_7465| Best HMM Match : RHH_1 (HMM E-Value=6.7) 28 8.2
SB_830| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_50632| Best HMM Match : ShTK (HMM E-Value=0.0091)
Length = 566
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = -2
Query: 426 KNGVRFQNPPLNGHRGCDNCHRRETTYSQTHQRRK*GDHQQHTQTGGAGNKLRHDLAVT* 247
+ G+ + L+G R C R+E + TH RK DH T T G K H ++ T
Sbjct: 316 RKGIMVMSRTLSGLRLCHAHCRKEDHSNVTHTSRK-EDHGNVTHTCRKGIKEDHGMSRTY 374
Query: 246 VADRIIYGERMSFNGRLNKLTIARL 172
+ RI R R+ +T R+
Sbjct: 375 IVRRITLMSRTRVVRRITVITRTRV 399
>SB_39346| Best HMM Match : Drf_FH1 (HMM E-Value=0.027)
Length = 345
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 206 LKLIRSPYIILSATYVTAKSWRSLLPAPPVW 298
L+ +P +L AT A WR L+P PP W
Sbjct: 123 LEATGTPTPLLEATCTPATPWRQLVPLPPSW 153
>SB_20697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 136 HRHNRQPQSGNAVGQHAQDFIINIDDQVAAAFGGIEVDGIDK 11
H HN+ + G+ VG HA N+D+Q + G E DGI++
Sbjct: 13 HVHNQVVKRGSHVGPHAY----NMDNQTVSEHRGDEDDGIER 50
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/75 (30%), Positives = 28/75 (37%)
Frame = +3
Query: 237 CRQLTSRPNHGAVYYQRLRSGYVADGHLISDAGESGSKSSLCGGSYRNHDVH*VGDSGNE 416
C + N +Y GY DG + SD E SKS SY NH H N
Sbjct: 403 CHSDANCTNTKGSFYCTCHVGYSGDGVICSDINECDSKSL---ASYHNHYAHICHSDANC 459
Query: 417 LHFCCPGSGNENCHI 461
+ GS CH+
Sbjct: 460 TN--TKGSFYCTCHV 472
>SB_51888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 87 YQAYRYRRPRGGARYQLL 104
>SB_51705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 66 YQAYRYRRPRGGARYQLL 83
>SB_50119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 26
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 6 YQAYRYRRPRGGARYQLL 23
>SB_43838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 37 YQAYRYRRPRGGARYQLL 54
>SB_37253| Best HMM Match : Atrophin-1 (HMM E-Value=0.68)
Length = 1113
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 593 YQAYRYRRPRGGARYQLL 610
>SB_35269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 116 YQAYRYRRPRGGARYQLL 133
>SB_34139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 49
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 29 YQAYRYRRPRGGARYQLL 46
>SB_33062| Best HMM Match : DUF485 (HMM E-Value=7.5)
Length = 168
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 27 YQAYRYRRPRGGARYQLL 44
>SB_24999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 65 YQAYRYRRPRGGARYQLL 82
>SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34)
Length = 674
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 533 YQAYRYRRPRGGARYQLL 550
>SB_967| Best HMM Match : Calx-beta (HMM E-Value=2.8)
Length = 123
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
R+QAYRYRRPR + +LL
Sbjct: 102 RHQAYRYRRPRGGARYQLL 120
>SB_57935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 47
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 27 YQAYRYRRPRGGARYQLL 44
>SB_56108| Best HMM Match : Kelch_2 (HMM E-Value=3.7)
Length = 170
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -2
Query: 123 DSPNPAMRLDSMRRISL*ISTIK*PLLLVGSRSTVSISLI 4
D+ N L RR+++ +S K L+L+GS ST+ SL+
Sbjct: 94 DAANVGELLKDWRRVNVAVSRAKRKLILIGSLSTLKASLL 133
>SB_54293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 96 YQAYRYRRPRGGARYQLL 113
>SB_50082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 21 YQAYRYRRPRGGARYQLL 38
>SB_46902| Best HMM Match : GYR (HMM E-Value=1.1)
Length = 54
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
R+QAYRYRRPR + +LL
Sbjct: 33 RHQAYRYRRPRGGARYQLL 51
>SB_44853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 43 YQAYRYRRPRGGARYQLL 60
>SB_39698| Best HMM Match : Rho_RNA_bind (HMM E-Value=3.4)
Length = 128
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 37 YQAYRYRRPRGGARYQLL 54
>SB_26734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 94 YQAYRYRRPRGGARYQLL 111
>SB_26387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 44
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 24 YQAYRYRRPRGGARYQLL 41
>SB_26286| Best HMM Match : DUF963 (HMM E-Value=0.82)
Length = 167
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 147 YQAYRYRRPRGGARYQLL 164
>SB_25779| Best HMM Match : DUF485 (HMM E-Value=5.1)
Length = 236
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 35 YQAYRYRRPRGGARYQLL 52
>SB_2527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 44
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
YQAYRYRRPR + +LL
Sbjct: 24 YQAYRYRRPRGGARYQLL 41
>SB_20893| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-23)
Length = 435
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQR 51
YQAYRYRRPR ++R
Sbjct: 14 YQAYRYRRPRGGARER 29
>SB_31955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 104 IAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVTAKSWRSL 277
+AG G S+ +GG+A YM G + ++ + I + I+L Y+T + SL
Sbjct: 146 LAGSGASLPLIGGFADYMFHYGKVFSYINYYTNTAAYIYT--ILLKIVYITVPTLISL 201
>SB_9061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
++QAYRYRRPR + +LL
Sbjct: 112 KHQAYRYRRPRGGARYQLL 130
>SB_40844| Best HMM Match : DUF595 (HMM E-Value=6.1)
Length = 194
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
++QAYRYRRPR + +LL
Sbjct: 137 KHQAYRYRRPRGGARYQLL 155
>SB_34032| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-22)
Length = 673
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
++QAYRYRRPR + +LL
Sbjct: 531 QHQAYRYRRPRGGARYQLL 549
>SB_11263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 94 QHAQDFIINIDDQVAAAFGG-IEVDGIDKLDI 2
+H D II+ + A G +EVDGIDKLDI
Sbjct: 2 KHFTDTIISANIGTKAGTGPPLEVDGIDKLDI 33
>SB_4480| Best HMM Match : TAT_ubiq (HMM E-Value=8.2)
Length = 107
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
++QAYRYRRPR + +LL
Sbjct: 86 QHQAYRYRRPRGGARYQLL 104
>SB_961| Best HMM Match : CUB (HMM E-Value=3.4e-08)
Length = 490
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 614 LRHFTCDAVNPGCSARC 664
L +FT DA NP CSA C
Sbjct: 159 LMNFTLDASNPSCSASC 175
>SB_51483| Best HMM Match : CAT (HMM E-Value=7.9e-08)
Length = 215
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 94 QHAQDFIINIDDQVAAAFGG-IEVDGIDKLDI 2
+H D II+ + A G +EVDGIDKLDI
Sbjct: 2 KHFTDTIISANIGTKAGTGPPLEVDGIDKLDI 33
>SB_45109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
R QAYRYRRPR + +LL
Sbjct: 106 RNQAYRYRRPRGGARYQLL 124
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -3
Query: 443 PATWAAKMEFVSRIPHSMDIVVAITATAE 357
PAT A+ +FV PH +DIVVA+ ++++
Sbjct: 790 PATATAEQKFVC--PHDLDIVVALDSSSD 816
>SB_38057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
++QAYRYRRPR + +LL
Sbjct: 146 QHQAYRYRRPRGGARYQLL 164
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 297 GYVADGHLISDAGESGSKSSLCGGSYRNHDVH*VGDSGNELHFCCPGSGNENCH 458
G++ +G L +D E K+ LC + H++ G+ C G ++CH
Sbjct: 549 GFIGEGDLCTDIDECHQKAHLCNKNALCHNI-----PGSYKCMCLKGYHGDDCH 597
>SB_59325| Best HMM Match : zf-CCHC (HMM E-Value=7.2)
Length = 107
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 87 HQAYRYRRPRGGARYQLL 104
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 207 HQAYRYRRPRGGARYQLL 224
>SB_50679| Best HMM Match : Tombus_P19 (HMM E-Value=2.1)
Length = 330
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 274 HQAYRYRRPRGGARYQLL 291
>SB_49689| Best HMM Match : fn3 (HMM E-Value=5.9)
Length = 61
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 41 HQAYRYRRPRGGARYQLL 58
>SB_49234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 49 HQAYRYRRPRGGARYQLL 66
>SB_48128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 43 HQAYRYRRPRGGARYQLL 60
>SB_47286| Best HMM Match : DUF485 (HMM E-Value=5.5)
Length = 99
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 8 HQAYRYRRPRGGARYQLL 25
>SB_45357| Best HMM Match : Sigma_1s (HMM E-Value=5.6)
Length = 322
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 125 HQAYRYRRPRGGARYQLL 142
>SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 115 HQAYRYRRPRGGARYQLL 132
>SB_33473| Best HMM Match : GST_N (HMM E-Value=0.028)
Length = 276
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 220 HQAYRYRRPRGGARYQLL 237
>SB_25292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 160 HQAYRYRRPRGGARYQLL 177
>SB_21775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 35 HQAYRYRRPRGGARYQLL 52
>SB_9745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 91 HQAYRYRRPRGGARYQLL 108
>SB_8585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 182 HQAYRYRRPRGGARYQLL 199
>SB_5820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 52 HQAYRYRRPRGGARYQLL 69
>SB_56836| Best HMM Match : GAF (HMM E-Value=2.8e-07)
Length = 552
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 459 HQAYRYRRPRGGARYQLL 476
>SB_56708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 84 HQAYRYRRPRGGARYQLL 101
>SB_52067| Best HMM Match : Pkinase_C (HMM E-Value=6.9)
Length = 57
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 37 HQAYRYRRPRGGARYQLL 54
>SB_40896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 44 HQAYRYRRPRGGARYQLL 61
>SB_40752| Best HMM Match : Ribosomal_L15e (HMM E-Value=2.5)
Length = 374
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 233 HQAYRYRRPRGGARYQLL 250
>SB_39500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 41 HQAYRYRRPRGGARYQLL 58
>SB_35314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 1 RYQAYRYRRPRSHQKQRLL 57
R QAYRYRRPR + +LL
Sbjct: 21 RDQAYRYRRPRGGARYQLL 39
>SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015)
Length = 921
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 7 QAYRYRRPRSHQ 42
QAYRYRRPR H+
Sbjct: 367 QAYRYRRPRDHK 378
>SB_12437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 159 HQAYRYRRPRGGARYQLL 176
>SB_7597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 152 HQAYRYRRPRGGARYQLL 169
>SB_7465| Best HMM Match : RHH_1 (HMM E-Value=6.7)
Length = 71
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 1 RYQAYRYRRPR 33
+YQAYRYRRPR
Sbjct: 57 KYQAYRYRRPR 67
>SB_830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 4 YQAYRYRRPRSHQKQRLL 57
+QAYRYRRPR + +LL
Sbjct: 249 HQAYRYRRPRGGARYQLL 266
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,067,962
Number of Sequences: 59808
Number of extensions: 563709
Number of successful extensions: 2842
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 2716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2840
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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