Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0851
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0322 + 16736013-16736072,16737200-16737305,16737436-167375...    28   8.1  

>10_08_0322 +
           16736013-16736072,16737200-16737305,16737436-16737584,
           16738344-16738596,16738928-16739037,16739302-16739376,
           16739477-16739563,16739754-16739840,16740021-16740158,
           16740438-16740503
          Length = 376

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +3

Query: 18  DATLVDSRK-LSFIFIALLPYFRTK*SCIY*VEK 116
           D+ L   +K LS +F+ +LPYF++K   IY  E+
Sbjct: 90  DSVLRKRQKVLSVVFLVVLPYFKSKLQSIYNKER 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,607,655
Number of Sequences: 37544
Number of extensions: 283606
Number of successful extensions: 439
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)