Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0851
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016446-4|AAC24164.1|  321|Caenorhabditis elegans Serpentine re...    29   3.2  
U64852-4|AAB04967.1|  192|Caenorhabditis elegans Galectin protei...    28   5.5  
AB038501-1|BAB11966.1|  192|Caenorhabditis elegans galectin LEC-...    28   5.5  
U40802-5|AAK19011.2|  339|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AF024503-11|AAG24091.2|  325|Caenorhabditis elegans Serpentine r...    28   7.3  
Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z54342-12|CAA91145.2|  758|Caenorhabditis elegans Hypothetical p...    27   9.7  

>AF016446-4|AAC24164.1|  321|Caenorhabditis elegans Serpentine
           receptor, class h protein23 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 418 IFRIFT*TLTSSKRPPFFLIIFLVYFRYSIIFSNSLYLV 534
           IFRIFT ++     P +FL +F ++F  S +F    Y +
Sbjct: 10  IFRIFTHSIHFVSLPTYFLALFSLFFIKSKVFVTYRYFL 48


>U64852-4|AAB04967.1|  192|Caenorhabditis elegans Galectin protein
           10 protein.
          Length = 192

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 179 GLSRPKVTHKQEINWERHFILSF---SSAYHINSDSEVLHDFSYCLP 310
           G+  P++ HK  ++   HF LS    +  YHI+ +   L D+ +  P
Sbjct: 71  GMWGPEIRHKNPLHHSEHFHLSIKVHAGYYHISVNGHHLADYPHRYP 117


>AB038501-1|BAB11966.1|  192|Caenorhabditis elegans galectin LEC-10
           protein.
          Length = 192

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = +2

Query: 179 GLSRPKVTHKQEINWERHFILSF---SSAYHINSDSEVLHDFSYCLP 310
           G+  P++ HK  ++   HF LS    +  YHI+ +   L D+ +  P
Sbjct: 71  GMWGPEIRHKNPLHHSEHFHLSIKVHAGYYHISVNGHHLADYPHRYP 117


>U40802-5|AAK19011.2|  339|Caenorhabditis elegans Hypothetical
           protein ZC477.5 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = -1

Query: 284 VPHCHC*YDRQRRNSK*SDVPNLFLVCVLP*A*TVRRFRSEFELISYSRILRQHENFLDS 105
           V HC   Y  +R NSK S +P++  +  L     VR F   F +IS     +   NF  +
Sbjct: 80  VMHCGSGYPDRRENSKSSHIPDVMPLLSLIRFFVVRDF-EVFVVISRKYAKQDATNFKSA 138

Query: 104 ID 99
           ID
Sbjct: 139 ID 140


>AF024503-11|AAG24091.2|  325|Caenorhabditis elegans Serpentine
           receptor, class u protein24 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 528 FSLSVILTRLNAQISKFDS*VQNIFFPVIYYPILCV 635
           FS+   +  +N Q S F   V  +F PV+Y P  CV
Sbjct: 9   FSIHGNIAYINYQFSFFTLPVLLLFVPVLYIPATCV 44


>Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 644 WAKDA*NWIIYHWEKYILN 588
           W K   N+I Y WEKYI N
Sbjct: 194 WHKLNENYITYFWEKYIYN 212


>Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 644 WAKDA*NWIIYHWEKYILN 588
           W K   N+I Y WEKYI N
Sbjct: 194 WHKLNENYITYFWEKYIYN 212


>Z54342-12|CAA91145.2|  758|Caenorhabditis elegans Hypothetical
           protein C08H9.3a protein.
          Length = 758

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +1

Query: 415 HIFRIFT*TLTSSKRPPFFLIIFLVYFRYSIIFSNSLYL-VCQLSS 549
           H F  F   L  SK P F   I L++ R+S+IF + LY+ VC L S
Sbjct: 76  HFFG-FDECLVISKTPRFSRRI-LIFQRFSVIFCDILYIAVCALYS 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,600,897
Number of Sequences: 27780
Number of extensions: 295974
Number of successful extensions: 616
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)