Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0849
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.8  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   9.0  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   9.0  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 536  LLKHLSGLLFMSGYIFECI*KNKQIGVPRTFPRKVPPD 423
            L+  + G+   +G  F+C+ KNK      T P ++ PD
Sbjct: 1446 LIFAIMGVQLFAGKYFKCVDKNK-----TTLPHEIIPD 1478


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 257 GSDLVLYGTSTPKNLIRVMVHVVGHRPDRRF 165
           G DLVL G   PK ++  M  +V  R +  F
Sbjct: 397 GKDLVLQGYRVPKGILVGMGQLVLQREEGYF 427


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 405 IKRGGCGGYAQRDRYTCQRPSARS 334
           +K   CGG  +    +C+ P++RS
Sbjct: 517 VKCAACGGPHRIGHMSCEHPASRS 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,009
Number of Sequences: 2352
Number of extensions: 14503
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)