Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0848
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.    25   2.3  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   4.0  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       23   7.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   7.0  

>AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 475 FNNILSHTIKVSSYEKIYLFG 537
           FNN + H +++ S E++YL G
Sbjct: 16  FNNPVPHVMRMLSPERLYLLG 36


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +1

Query: 148 MTDKKRAREKTYRHFLSGVDPTITYALLISYLYYLQYNTYPRKSVCISL 294
           +T K   R KT  + ++ + P +    L   ++YL  ++  + ++CIS+
Sbjct: 235 ITFKLTMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVTLCISI 283


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +1

Query: 226 LLISYLYYLQYNTYPRKSVCISL*RTFLHGSKTREYYYTEISP*KTDKNVTIVFTVV-PI 402
           L I +  Y   NTY   S  I +    L+  K ++  YT ++      N+  VF  V  +
Sbjct: 282 LTICFPEYTGSNTYEEASSYIRMKFENLNRRKDQKEIYTHLTCATDTSNIQFVFDAVSDV 341

Query: 403 VRKCNEK 423
           + K N K
Sbjct: 342 IIKNNLK 348


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = +1

Query: 169 REKTYRHFLSGVDPTITYALLISYLYYLQYNTYPRKSVCISL 294
           R KT  + ++ + P +  + L   ++YL  ++  + S+CIS+
Sbjct: 236 RRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISI 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,948
Number of Sequences: 2352
Number of extensions: 16272
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)