Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0846
(662 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY128445-1|AAM75038.1| 406|Drosophila melanogaster LD24471p pro... 36 0.037
AE013599-3714|AAF47086.1| 406|Drosophila melanogaster CG4882-PA... 36 0.037
AB010265-1|BAA32693.1| 406|Drosophila melanogaster protein ( Dr... 36 0.037
AB010261-2|BAA32685.1| 406|Drosophila melanogaster protein ( Dr... 36 0.037
AY070543-1|AAL48014.1| 263|Drosophila melanogaster LD24657p pro... 29 5.6
AE013599-4001|AAF47306.1| 263|Drosophila melanogaster CG3776-PA... 29 5.6
>AY128445-1|AAM75038.1| 406|Drosophila melanogaster LD24471p
protein.
Length = 406
Score = 36.3 bits (80), Expect = 0.037
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 128 ELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIA 250
E I +L++P+ YGLF+D +S LL+ LL + ++A +A
Sbjct: 95 ETISVLRNPIQYGLFVDQFSGCFLLDFLLHNGHAVESAQLA 135
Score = 29.5 bits (63), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 STIMLQEEY-NNDILCSLCQYSSYMFIKNYVEPEPAVMXXXXXXXXXXXXRVKFLRNPYF 426
+TI++ NN++L SL S + F K + E + + RVKF+RN Y
Sbjct: 135 ATILVDRNLCNNELLESLALQSFWSFAKEFKPFESSQVQPPAKNVEVEKVRVKFIRN-YP 193
Query: 427 DDHFDIKDRLKL 462
DD + + KL
Sbjct: 194 DDASENTEEKKL 205
>AE013599-3714|AAF47086.1| 406|Drosophila melanogaster CG4882-PA
protein.
Length = 406
Score = 36.3 bits (80), Expect = 0.037
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 128 ELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIA 250
E I +L++P+ YGLF+D +S LL+ LL + ++A +A
Sbjct: 95 ETISVLRNPIQYGLFVDQFSGCFLLDFLLHNGHAVESAQLA 135
Score = 29.5 bits (63), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 STIMLQEEY-NNDILCSLCQYSSYMFIKNYVEPEPAVMXXXXXXXXXXXXRVKFLRNPYF 426
+TI++ NN++L SL S + F K + E + + RVKF+RN Y
Sbjct: 135 ATILVDRNLCNNELLESLALQSFWSFAKEFKPFESSQVQPPAKNVEVEKVRVKFIRN-YP 193
Query: 427 DDHFDIKDRLKL 462
DD + + KL
Sbjct: 194 DDASENTEEKKL 205
>AB010265-1|BAA32693.1| 406|Drosophila melanogaster protein (
Drosophila melanogastermRNA at 60A locus in chromosome
2R, complete cds. ).
Length = 406
Score = 36.3 bits (80), Expect = 0.037
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 128 ELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIA 250
E I +L++P+ YGLF+D +S LL+ LL + ++A +A
Sbjct: 95 ETISVLRNPIQYGLFVDQFSGCFLLDFLLHNGHAVESAQLA 135
Score = 29.5 bits (63), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 STIMLQEEY-NNDILCSLCQYSSYMFIKNYVEPEPAVMXXXXXXXXXXXXRVKFLRNPYF 426
+TI++ NN++L SL S + F K + E + + RVKF+RN Y
Sbjct: 135 ATILVDRNLCNNELLESLALQSFWSFAKEFKPFESSQVQPPAKNVEVEKVRVKFIRN-YP 193
Query: 427 DDHFDIKDRLKL 462
DD + + KL
Sbjct: 194 DDASENTEEKKL 205
>AB010261-2|BAA32685.1| 406|Drosophila melanogaster protein (
Drosophila melanogastergenes at 60A locus in chromosome
2R. ).
Length = 406
Score = 36.3 bits (80), Expect = 0.037
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 128 ELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIA 250
E I +L++P+ YGLF+D +S LL+ LL + ++A +A
Sbjct: 95 ETISVLRNPIQYGLFVDQFSGCFLLDFLLHNGHAVESAQLA 135
Score = 29.5 bits (63), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 250 STIMLQEEY-NNDILCSLCQYSSYMFIKNYVEPEPAVMXXXXXXXXXXXXRVKFLRNPYF 426
+TI++ NN++L SL S + F K + E + + RVKF+RN Y
Sbjct: 135 ATILVDRNLCNNELLESLALQSFWSFAKEFKPFESSQVQPPAKNVEVEKVRVKFIRN-YP 193
Query: 427 DDHFDIKDRLKL 462
DD + + KL
Sbjct: 194 DDASENTEEKKL 205
>AY070543-1|AAL48014.1| 263|Drosophila melanogaster LD24657p
protein.
Length = 263
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 400 VKFLRNPYFDDHFDIKDRLKLAGKTLAWISEK 495
++F+ PYFD F +KD + A + L +S K
Sbjct: 92 IQFIIRPYFDSEFQLKDFIYGAKQALQVVSSK 123
>AE013599-4001|AAF47306.1| 263|Drosophila melanogaster CG3776-PA
protein.
Length = 263
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 400 VKFLRNPYFDDHFDIKDRLKLAGKTLAWISEK 495
++F+ PYFD F +KD + A + L +S K
Sbjct: 92 IQFIIRPYFDSEFQLKDFIYGAKQALQVVSSK 123
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,460,130
Number of Sequences: 53049
Number of extensions: 417992
Number of successful extensions: 864
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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