Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0845
         (690 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E87C89 Cluster: phosphate regulon sensor protein...    36   0.71 
UniRef50_Q4N850 Cluster: TashAT2 protein, putative; n=1; Theiler...    36   1.2  
UniRef50_A5N1P5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  

>UniRef50_UPI0000E87C89 Cluster: phosphate regulon sensor protein
           PhoR; n=1; Methylophilales bacterium HTCC2181|Rep:
           phosphate regulon sensor protein PhoR - Methylophilales
           bacterium HTCC2181
          Length = 434

 Score = 36.3 bits (80), Expect = 0.71
 Identities = 21/72 (29%), Positives = 34/72 (47%)
 Frame = -2

Query: 575 QSRRVYMKYMVLNKTFGMLLQDSSIFLLMLTLICCVSVLHV*MNFI*YWSEPIELWLEDP 396
           Q  R ++   ++ + F  LL   S+F L  +L+   S L + + F  YW   +  WL +P
Sbjct: 2   QEIRWHLSLFIIFEIFSTLLV-LSVFDLETSLLFLASTLVLFLAFHIYWVYRLNQWLNNP 60

Query: 395 TITGISGYYSLW 360
            I  +   Y LW
Sbjct: 61  MINNLPNGYGLW 72


>UniRef50_Q4N850 Cluster: TashAT2 protein, putative; n=1; Theileria
           parva|Rep: TashAT2 protein, putative - Theileria parva
          Length = 1111

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
 Frame = +1

Query: 478 IKVNISRKIDES---CNSIP-NVLFKTIYFM*TRRD*KDNFNLIYLKLLRSSTRQRLSWV 645
           + ++IS +IDES   C SI  N L++ IY+  T    K     I   + RS TR+ LS  
Sbjct: 586 VSLDISSEIDESLLYCRSIEKNGLYQLIYYPKTGYYLK-RIKCITSLVWRSDTRRCLSAT 644

Query: 646 LTMDQN-LVGLPKLKI 690
           LTMD+N ++ L KL++
Sbjct: 645 LTMDKNDIIRLIKLEL 660


>UniRef50_A5N1P5 Cluster: Putative uncharacterized protein; n=1;
           Clostridium kluyveri DSM 555|Rep: Putative
           uncharacterized protein - Clostridium kluyveri DSM 555
          Length = 467

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -2

Query: 689 IFNFGKPTKFWSIVRTQLSLCLVDDLNNFRYIRLKLSFQSRRVYMKYMVLNK 534
           I+N  K   F+ I    +SLCL    N F+Y   K+    + +Y+ Y  LNK
Sbjct: 215 IYNNIKIILFFVIALILISLCLSIIYNFFKYYNFKMWADEKNIYINYGALNK 266


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,177,312
Number of Sequences: 1657284
Number of extensions: 10213913
Number of successful extensions: 19751
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19748
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)