Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0844
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0412 - 18749430-18749587,18749696-18749857,18750062-187501...    29   4.6  
07_01_1124 + 10392909-10392974,10393037-10393455,10393503-103936...    28   8.1  

>02_03_0412 -
           18749430-18749587,18749696-18749857,18750062-18750194,
           18751640-18751744,18751818-18751935,18752232-18752320,
           18752407-18753660,18753785-18753831,18754285-18754339,
           18754783-18754884
          Length = 740

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 519 NFRFYLPDNRIWMVNSLVSFEFI*WSSLSCIAYNSPC 409
           NF+F + D   + +  +   + + W  + C+ Y SPC
Sbjct: 192 NFKFVVLDTGSYEIELMDPDKMLQWEDIVCVRYYSPC 228


>07_01_1124 +
           10392909-10392974,10393037-10393455,10393503-10393657,
           10393792-10394247,10394379-10395298
          Length = 671

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 349 KILKCYFTNVRNIISTVSKCYYNVYLH 269
           K+L  Y TN++ IIST  K + N+  H
Sbjct: 425 KVLSRYSTNIKRIISTKEKKFTNLKSH 451


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,933,140
Number of Sequences: 37544
Number of extensions: 290281
Number of successful extensions: 599
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)