Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0843
         (348 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    22   5.7  
AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding pr...    22   7.5  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    22   7.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    21   9.9  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 87  IFVLIQIYFELYFLLTS 137
           IF +  + F++YF+LTS
Sbjct: 305 IFAVCWLPFQIYFILTS 321


>AY330174-1|AAQ16280.1|  178|Anopheles gambiae odorant-binding
           protein AgamOBP47 protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 204 GKLKRRKLISGVPRTC 157
           G+ KR+  + G+PR C
Sbjct: 44  GQTKRQMAMEGIPRGC 59


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 204 GKLKRRKLISGVPRTC 157
           G+ KR+  + G+PR C
Sbjct: 94  GQTKRQMAMEGIPRGC 109


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -3

Query: 268  PVGRRDRSNGYEKKFFEQQSKRKAQEEEAYKWSTE 164
            P+G  D      K+F ++    K +  ++Y W  E
Sbjct: 974  PLGIVDTVKAKAKQFMQRVWSLKKENGDSYGWDEE 1008


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,496
Number of Sequences: 2352
Number of extensions: 5460
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)