Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0843
         (348 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047559-1|AAK77291.1|  647|Drosophila melanogaster GH07383p pro...    49   1e-06
AE014297-3576|AAF56315.1|  647|Drosophila melanogaster CG13625-P...    49   1e-06
BT021952-1|AAX51657.1|  899|Drosophila melanogaster GH01093p pro...    28   3.7  
AE014297-1303|AAF54641.1|  533|Drosophila melanogaster CG31374-P...    28   3.7  
AE014297-1302|AAO41543.1|  935|Drosophila melanogaster CG31374-P...    28   3.7  
AE014297-1301|AAF54642.2|  935|Drosophila melanogaster CG31374-P...    28   3.7  
AE014298-1816|AAG22348.1|  644|Drosophila melanogaster CG3754-PA...    27   4.9  

>AY047559-1|AAK77291.1|  647|Drosophila melanogaster GH07383p
           protein.
          Length = 647

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 18/32 (56%), Positives = 30/32 (93%)
 Frame = -3

Query: 253 DRSNGYEKKFFEQQSKRKAQEEEAYKWSTEDL 158
           DRSNGYE+++F++Q++R+A ++EAYK+S ED+
Sbjct: 616 DRSNGYEQRWFDKQNERRAVQDEAYKYSVEDM 647



 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -1

Query: 321 PKYKGNFPPNRFNLRPGYRWDG 256
           PKY+G+FP NRF +RPGYRWDG
Sbjct: 593 PKYEGSFPENRFGIRPGYRWDG 614


>AE014297-3576|AAF56315.1|  647|Drosophila melanogaster CG13625-PA
           protein.
          Length = 647

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 18/32 (56%), Positives = 30/32 (93%)
 Frame = -3

Query: 253 DRSNGYEKKFFEQQSKRKAQEEEAYKWSTEDL 158
           DRSNGYE+++F++Q++R+A ++EAYK+S ED+
Sbjct: 616 DRSNGYEQRWFDKQNERRAVQDEAYKYSVEDM 647



 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -1

Query: 321 PKYKGNFPPNRFNLRPGYRWDG 256
           PKY+G+FP NRF +RPGYRWDG
Sbjct: 593 PKYEGSFPENRFGIRPGYRWDG 614


>BT021952-1|AAX51657.1|  899|Drosophila melanogaster GH01093p
           protein.
          Length = 899

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 298 SEPLQPETRLPVGRRDRSNGYEKKFFEQQ-SKRKAQEEEAYK 176
           S+P +PE +  V RR+R +G E K    + +K K +EE A K
Sbjct: 702 SDPDEPEEK-KVERRERRSGKELKILRSKLTKLKVKEEAAKK 742


>AE014297-1303|AAF54641.1|  533|Drosophila melanogaster CG31374-PA,
           isoform A protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 298 SEPLQPETRLPVGRRDRSNGYEKKFFEQQ-SKRKAQEEEAYK 176
           S+P +PE +  V RR+R +G E K    + +K K +EE A K
Sbjct: 336 SDPDEPEEK-KVERRERRSGKELKILRSKLTKLKVKEEAAKK 376


>AE014297-1302|AAO41543.1|  935|Drosophila melanogaster CG31374-PC,
           isoform C protein.
          Length = 935

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 298 SEPLQPETRLPVGRRDRSNGYEKKFFEQQ-SKRKAQEEEAYK 176
           S+P +PE +  V RR+R +G E K    + +K K +EE A K
Sbjct: 738 SDPDEPEEK-KVERRERRSGKELKILRSKLTKLKVKEEAAKK 778


>AE014297-1301|AAF54642.2|  935|Drosophila melanogaster CG31374-PB,
           isoform B protein.
          Length = 935

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -3

Query: 298 SEPLQPETRLPVGRRDRSNGYEKKFFEQQ-SKRKAQEEEAYK 176
           S+P +PE +  V RR+R +G E K    + +K K +EE A K
Sbjct: 738 SDPDEPEEK-KVERRERRSGKELKILRSKLTKLKVKEEAAKK 778


>AE014298-1816|AAG22348.1|  644|Drosophila melanogaster CG3754-PA
           protein.
          Length = 644

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 265 VGRRDRSNGYEKKFFEQQSKRKAQEEEAYKWSTED 161
           V  R RS+  E    EQ   ++ QE+E ++  TED
Sbjct: 265 VSSRSRSSELEDDHHEQDQVQEEQEQEQHQGDTED 299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,232,730
Number of Sequences: 53049
Number of extensions: 268047
Number of successful extensions: 633
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)