Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0842
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   5.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.3  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 119 LYCCTSDYSKLL*QCLQCR 63
           +YCC ++++  L Q   CR
Sbjct: 160 VYCCDNNFNVFLRQVFTCR 178


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 427 DLEIRSTMTFSYLIPLSILNY 365
           D E+RS+  FSY+ P S  +Y
Sbjct: 145 DDELRSSSAFSYIKPSSERDY 165


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = -1

Query: 635 VIMTTATRSKKLLEFYNKRYNKFRFPVSTTRTRLLYYVN 519
           +++T       +LE+   +   +R PV+ T + L+  +N
Sbjct: 293 ILITVTVCELTILEYKRTKKLLYRIPVTKTDSMLIRNIN 331


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = -1

Query: 635 VIMTTATRSKKLLEFYNKRYNKFRFPVSTTRTRLLYYVN 519
           +++T       +LE+   +   +R PV+ T + L+  +N
Sbjct: 118 ILITVTVCELTILEYKRTKKLLYRIPVTKTDSMLIRNIN 156


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 39  ESYRSHRATTLKTL 80
           ES+  H+ATTL+T+
Sbjct: 306 ESFYLHKATTLETV 319


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 493 QNNHWSIKTHRHFTQPLMQNN 431
           Q N+W I   R   QP++  +
Sbjct: 380 QVNNWFINARRRIVQPMIDQS 400


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,358
Number of Sequences: 336
Number of extensions: 3937
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)