Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0842
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    28   0.24 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.2  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = -1

Query: 638 AVIMTTATRSKKLLEFYNKRYNKFRFPVSTTRTRLLYYVN*KKTMLTWSK*SLEYK 471
           A I+  A R  + LE  N+  +K+  P+    T LL+Y    KT++ W + S+++K
Sbjct: 228 ARIVNEANRLVRGLERLNEPVDKWDTPL----TSLLFYKLDSKTLVAWEQYSVDFK 279


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 150 HKNFPKNTIESLLLYI*LFKTIVTMSSMSWLYVSDSFR 37
           H   P   I   L Y+ L K    M  M+W +++DSFR
Sbjct: 192 HVKHPHKLIVMYLKYLELEKH-QNMMQMAWNFMNDSFR 228


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 615 CSRCHDDCKGTRSPVRTESTAG 680
           C  CH  C G R P  T +  G
Sbjct: 565 CINCHKTCVGCRGPRDTIAPDG 586


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,619
Number of Sequences: 2352
Number of extensions: 15880
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)